Evidence map›Paper›PMID 37605192›Full record

ArticleWorld journal of surgical oncology2023

Novel prognostic gene signature for pancreatic ductal adenocarcinoma based on hypoxia.

Min Ren, Liaoliao Feng, Rongrong Zong, Huiru Sun

Open access · goldAbstract read
In one paragraph

Article in World journal of surgical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Min RenCollege of Life Science, Yan'an University, Yan'an, 716000, China.
Liaoliao FengCollege of Life Science, Yan'an University, Yan'an, 716000, China.
Rongrong ZongCollege of Life Science, Yan'an University, Yan'an, 716000, China.
Huiru SunCollege of Life Science, Yan'an University, Yan'an, 716000, China. shr@yau.edu.cn.
Yan'an University · CN

Funding

the Natural Science Basic Research Project of Shaanxi Province 2022JQ-159
6 · The paper itself

Abstract

backgroundCurrently, there is lack of marker to accurately assess the prognosis of patients diagnosed with pancreatic ductal adenocarcinoma (PDAC). This study aims to establish a hypoxia-related risk scoring model that can effectively predict the prognosis and chemotherapy outcomes of PDAC patients.

methodsUsing unsupervised consensus clustering algorithms, we comprehensively analyzed The Cancer Genome Atlas (TCGA) data to identify two distinct hypoxia clusters and used the weighted gene co-expression network analysis (WGCNA) to examine gene sets significantly associated with these hypoxia clusters. Then univariate Cox regression, the least absolute shrinkage and selection operator (LASSO) Cox regression and multivariate Cox regression were used to construct a signature and its efficacy was evaluated using the International Cancer Genome Consortium (ICGC) PDAC cohort. Further, the correlation between the risk scores obtained from the signature and carious clinical, pathological, immunophenotype, and immunoinfiltration factors as well as the differences in immunotherapy potential and response to common chemotherapy drugs between high-risk and low-risk groups were evaluated.

resultsFrom a total of 8 significantly related modules and 4423 genes, 5 hypoxia-related signature genes were identified to construct a risk model. Further analysis revealed that the overall survival rate (OS) of patients in the low-risk group was significantly higher than the high-risk group. Univariate and multivariate Cox regression analysis showed that the risk scoring signature was an independent factor for prognosis prediction. Analysis of immunocyte infiltration and immunophenotype showed that the immune score and the anticancer immune response in the high-risk were significantly lower than that in the low-risk group.

conclusionThe constructed hypoxia-associated prognostic signature demonstrated could be used as a potential risk classifier for PDAC.

Indexed as

Carcinoma, Pancreatic DuctalPancreatic NeoplasmsHumansHypoxiaPrognosisARID5AGene signatureHypoxiaPancreatic ductal adenocarcinoma (PDAC)Prognosis

Identifiers

PMID37605192
PMCPMC10464224
OpenAlexW4386046724

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.