Evidence map›Paper›PMID 37604495›Full record

ArticleJournal of chemical information and modeling2023

SMiPoly: Generation of a Synthesizable Polymer Virtual Library Using Rule-Based Polymerization Reactions.

Mitsuru Ohno, Yoshihiro Hayashi, Qi Zhang, Yu Kaneko, Ryo Yoshida

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Mitsuru OhnoDaicel Corporation, Kita-ku, 530-0011 Osaka, Japan.ORCID 0000-0002-4588-1927
Yoshihiro HayashiThe Institute of Statistical Mathematics, Research Organization of Information and Systems, Tachikawa, Tokyo 190-8562, Japan.ORCID 0000-0002-7650-4083
Qi ZhangThe Institute of Statistical Mathematics, Research Organization of Information and Systems, Tachikawa, Tokyo 190-8562, Japan.
Yu KanekoDaicel Corporation, Kita-ku, 530-0011 Osaka, Japan.ORCID 0000-0001-8617-0876
Ryo YoshidaThe Institute of Statistical Mathematics, Research Organization of Information and Systems, Tachikawa, Tokyo 190-8562, Japan.ORCID 0000-0001-8092-0162

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent advances in machine learning have led to the rapid adoption of various computational methods for de novo molecular design in polymer research, including high-throughput virtual screening and inverse molecular design. In such workflows, molecular generators play an essential role in creation or sequential modification of candidate polymer structures. Machine learning-assisted molecular design has made great technical progress over the past few years. However, the difficulty of identifying synthetic routes to such designed polymers remains unresolved. To address this technical limitation, we present Small Molecules into Polymers (SMiPoly), a Python library for virtual polymer generation that implements 22 chemical rules for commonly applied polymerization reactions. For given small organic molecules to form a candidate monomer set, the SMiPoly generator conducts possible polymerization reactions to generate an exhaustive list of potentially synthesizable polymers. In this study, using 1083 readily available monomers, we generated 169,347 unique polymers forming seven different molecular types: polyolefin, polyester, polyether, polyamide, polyimide, polyurethane, and polyoxazolidone. By comparing the distribution of the virtually created polymers with approximately 16,000 real polymers synthesized so far, it was found that the coverage and novelty of the SMiPoly-generated polymers can reach 48 and 53%, respectively. Incorporating the SMiPoly library into a molecular design workflow will accelerate the process of de novo polymer synthesis by shortening the step to select synthesizable candidate polymers.

Indexed as

Libraries, DigitalPolymersGene LibraryHigh-Throughput Screening AssaysPolymerizationPolymers

Identifiers

PMID37604495
PMCPMC10498440

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.