Evidence map›Paper›PMID 37600348›Full record

ReviewMaterials today. Bio2023

Unveiling extracellular matrix assembly: Insights and approaches through bioorthogonal chemistry.

Shima Tavakoli, Austin Evans, Oommen P Oommen, Laura Creemers, Jharna Barman Nandi, Jöns Hilborn, Oommen P Varghese

Open access · goldAbstract readReview
In one paragraph

Review in Materials today. Bio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Shima TavakoliMacromolecular Chemistry Division, Department of Chemistry-Ångström Laboratory, Uppsala University, 751 21, Uppsala, Sweden.
Austin EvansBioengineering and Nanomedicine Group, Faculty of Medicine and Health Technologies, Tampere University, 33720, Tampere, Finland.
Oommen P OommenBioengineering and Nanomedicine Group, Faculty of Medicine and Health Technologies, Tampere University, 33720, Tampere, Finland.
Laura CreemersDepartment of Orthopedics, University Medical Center Utrecht, 3584, CX, Utrecht, the Netherlands.
Jharna Barman NandiDepartment of Chemistry, Sarojini Naidu College for Women, 30 Jessore Road, Kolkata, 700028, India.
Jöns HilbornMacromolecular Chemistry Division, Department of Chemistry-Ångström Laboratory, Uppsala University, 751 21, Uppsala, Sweden.
Oommen P VargheseMacromolecular Chemistry Division, Department of Chemistry-Ångström Laboratory, Uppsala University, 751 21, Uppsala, Sweden.
Uppsala University · SETampere University · FIUniversity College for Women · INUniversity Medical Center Utrecht · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Visualizing cells, tissues, and their components specifically without interference with cellular functions, such as biochemical reactions, and cellular viability remains important for biomedical researchers worldwide. For an improved understanding of disease progression, tissue formation during development, and tissue regeneration, labeling extracellular matrix (ECM) components secreted by cells persists is required. Bioorthogonal chemistry approaches offer solutions to visualizing and labeling ECM constituents without interfering with other chemical or biological events. Although biorthogonal chemistry has been studied extensively for several applications, this review summarizes the recent advancements in using biorthogonal chemistry specifically for metabolic labeling and visualization of ECM proteins and glycosaminoglycans that are secreted by cells and living tissues. Challenges, limitations, and future directions surrounding biorthogonal chemistry involved in the labeling of ECM components are discussed. Finally, potential solutions for improvements to biorthogonal chemical approaches are suggested. This would provide theoretical guidance for labeling and visualization of de novo proteins and polysaccharides present in ECM that are cell-secreted for example during tissue remodeling or

Indexed as

Bioorthogonal chemistryExtracellular matrixMetabolic labelingVisualizing cells

Identifiers

PMID37600348
PMCPMC10432810
OpenAlexW4385616513

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.