Evidence map›Paper›PMID 37598857›Full record

ArticleKidney international2023

Certain heterozygous variants in the kinase domain of the serine/threonine kinase NEK8 can cause an autosomal dominant form of polycystic kidney disease.

Laura R Claus, Chuan Chen, Jennifer Stallworth, Joshua L Turner, Gisela G Slaats, Alexandra L Hawks, Holly Mabillard, Sarah R Senum, Sujata Srikanth, Heather Flanagan-Steet and 38 more

Open access · greenAbstract read
In one paragraph

Article in Kidney international, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Monogenic Etiologies of Kidney Cysts in the Pediatric Population: An Observational Cohort Study.Clinical journal of the American Society of Nephrology : CJASN · 2026
    Observational
  3. Article
  4. Article
  5. Exome Sequencing in a Large Cohort with Ciliopathy-Related Kidney Disease.Clinical journal of the American Society of Nephrology : CJASN · 2026
    Article
  6. Typical and atypical ADPKD: predicted pathogenic genetic variants and population frequencies.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2026
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Polycystic Kidney Disease in Children: The Current Status and the Next Horizon.American journal of kidney diseases : the official journal of the National Kidney Foundation · 2025
    Review
  14. Characterizing the ADPKD-Kidney international reports · 2025
    Article
  15. Article
  16. Functional Analysis of aKidney international reports · 2025
    Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

48 authors at 20 institutions in 8 countries.

Laura R ClausDepartment of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands.
Chuan ChenDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, USA.
Jennifer StallworthResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA.
Joshua L TurnerDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA.
Gisela G SlaatsDepartment of Nephrology and Hypertension, Regenerative Medicine Center Utrecht, University Medical Center Utrecht, Utrecht, the Netherlands.
Alexandra L HawksDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA.
Holly MabillardNewcastle University, Translational and Clinical Research Institute, Newcastle upon Tyne, UK.
Sarah R SenumDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Sujata SrikanthResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA.
Heather Flanagan-SteetResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA.
Raymond J LouieResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA.
Josh SilverFred A. Litwin Family Centre in Genetic Medicine, University Health Network and Mount Sinai Hospital, Toronto, Ontario, Canada; Department of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada.
Jordan Lerner-EllisDepartment of Molecular Genetics, University of Toronto, Toronto, Ontario, Canada; Pathology and Laboratory Medicine, Mount Sinai Hospital, Toronto, Ontario, Canada; Lunenfeld-Tanenbaum Research Institute, Toronto, Ontario, Canada.
Chantal MorelFred A. Litwin Family Centre in Genetic Medicine, University Health Network and Mount Sinai Hospital, Toronto, Ontario, Canada; Department of Medicine, University of Toronto, Toronto, Ontario, Canada.
Chloe MightonPathology and Laboratory Medicine, Mount Sinai Hospital, Toronto, Ontario, Canada; Lunenfeld-Tanenbaum Research Institute, Toronto, Ontario, Canada.
Frank SleutelsDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, the Netherlands.
Marjon van SlegtenhorstDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, the Netherlands.
Tjakko van HamDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, the Netherlands.
Alice S BrooksDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, the Netherlands.
Eiske M DorresteijnDepartment of Pediatric Nephrology, Erasmus University Medical Center, Sophia Children's Hospital, Rotterdam, the Netherlands.
Tahsin Stefan BarakatDepartment of Clinical Genetics, Erasmus University Medical Center, Rotterdam, the Netherlands.
Karin DahanInstitute Pathology and Genetic, Center of Human Genetics, Charleroi, Belgium.
Nathalie DemoulinDivision of Nephrology, Cliniques Universitaires Saint-Luc, Brussels, Belgium; Recherche Expérimentale et Clinique, UCLouvain, Brussels, Belgium.
Eric Jean GoffinDivision of Nephrology, Cliniques Universitaires Saint-Luc, Brussels, Belgium; Recherche Expérimentale et Clinique, UCLouvain, Brussels, Belgium.
Eric OlingerNewcastle University, Translational and Clinical Research Institute, Newcastle upon Tyne, UK.
Genomics England Research Consortium
Martin LarsenDepartment of Clinical Genetics, Odense University Hospital, Odense, Denmark; Department of Clinical Research, University of Southern Denmark, Odense, Denmark.
Jens Michael HertzDepartment of Clinical Genetics, Odense University Hospital, Odense, Denmark; Department of Clinical Research, University of Southern Denmark, Odense, Denmark.
Marc R LilienDepartment of Pediatric Nephrology, Wilhelmina Children's Hospital, Utrecht, the Netherlands.
Lena ObeidováInstitute of Biology and Medical Genetics, First Faculty of Medicine, Charles University and General University Hospital, Prague, Czech Republic.
Tomas SeemanDepartment of Pediatrics, 2nd Faculty of Medicine, Charles University, Prague, Czech Republic; Department of Pediatrics, University Hospital Ostrava, Ostrava, Czech Republic; Faculty of Medicine, University of Ostrava, Ostrava, Czech Republic.
Hillarey K StoneDivision of Nephrology and Hypertension, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Larissa KerecukBirmingham Women's and Children's National Health Services (NHS) Foundation Trust, National Institute for Health Care and Research (NIHR) Clinical Research Network (CRN) West Midlands, Birmingham, UK.
Mihai GurguFundeni Clinical Institute, Bucharest, Romania.
Fjodor A Yousef YengejDepartment of Nephrology and Hypertension, University Medical Centre Utrecht, Utrecht, the Netherlands; Hubrecht Institute for Developmental Biology and Stem Cell Research-KNAW, Utrecht, the Netherlands.
Carola M E AmmerlaanDepartment of Nephrology and Hypertension, University Medical Centre Utrecht, Utrecht, the Netherlands; Hubrecht Institute for Developmental Biology and Stem Cell Research-KNAW, Utrecht, the Netherlands.
Maarten B RookmaakerDepartment of Nephrology and Hypertension, University Medical Centre Utrecht, Utrecht, the Netherlands.
Christian HannaDivision of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA; Division of Pediatric Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
R Curtis RogersResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA.
Karen DuranDepartment of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands.
Edith PetersDepartment of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands.
John A SayerNewcastle University, Translational and Clinical Research Institute, Newcastle upon Tyne, UK; Renal Services, The Newcastle upon Tyne Hospitals NHS Foundation Trust, Newcastle, UK; National Institute for Health and Care Research (NIHR) Biomedical Research Centre, Newcastle, UK.
Gijs van HaaftenDepartment of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands.
Peter C HarrisDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, USA; Division of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA.
Kun LingDepartment of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, Minnesota, USA; Division of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota, USA. Electronic address: Ling.Kun@mayo.edu.
Jennifer M MasonDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA. Electronic address: jmason4@clemson.edu.
Albertien M van EerdeDepartment of Genetics, University Medical Center Utrecht, Utrecht, the Netherlands. Electronic address: A.vanEerde@umcutrecht.nl.
Richard SteetResearch Division, Greenwood Genetic Center, Greenwood, South Carolina, USA. Electronic address: rsteet@ggc.org.
University Medical Center Utrecht · NLGreenwood Genetic Center · USMayo Clinic · USErasmus MC · NLMount Sinai Hospital · CAClemson University · USCliniques Universitaires Saint-Luc · BENewcastle University · GBNewcastle upon Tyne Hospitals NHS Foundation Trust · GBUniversity of Southern Denmark · DKCharles University · CZCincinnati Children's Hospital Medical Center · USInstitute of Pathology and Genetics · BEInstitutul Clinic Fundeni · RONational Health Service · GBPediatrics and Genetics · USUniversity of Ostrava · CZUniversity of Toronto · CAUtrecht University · NLWilhelmina Children's Hospital · NL

Funding

ADPKD:Disease Spectrum &Genotype-Phenotype CorrelationsR01DK058816 · NIDDK · MAYO CLINIC ROCHESTER · PI Peter C. Harris · 2001 to 2026
$11.3M
Transgenic and Knockout Models of ADPKDR01DK059597 · NIDDK · MAYO CLINIC ROCHESTER · PI Peter C. Harris · 2002 to 2026
$9.5M
Polycystin Function Resource Development CoreU54DK126126 · NIDDK · UNIVERSITY OF KANSAS MEDICAL CENTER · PI DARREN P. WALLACE · 2020 to 2026
$5.8M
Role of homologous recombination in the replication stress responseR35GM142512 · NIGMS · CLEMSON UNIVERSITY · PI MASON, JENNIFER · 2021 to 2025
$2.1M
Medical Research Council MC_EX_MR/M009203/1Medical Research Council MC_PC_14089Medical Research Council MR/M009203/1Medical Research Council MR/V028723/1Medical Research Council MR/Y007808/1NIDDK NIH HHS R01 DK058816NIDDK NIH HHS R01 DK059597NIDDK NIH HHS U54 DK126126NIGMS NIH HHS R35 GM142512
6 · The paper itself

Abstract

Autosomal dominant polycystic kidney disease (ADPKD) resulting from pathogenic variants in PKD1 and PKD2 is the most common form of PKD, but other genetic causes tied to primary cilia function have been identified. Biallelic pathogenic variants in the serine/threonine kinase NEK8 cause a syndromic ciliopathy with extra-kidney manifestations. Here we identify NEK8 as a disease gene for ADPKD in 12 families. Clinical evaluation was combined with functional studies using fibroblasts and tubuloids from affected individuals. Nek8 knockout mouse kidney epithelial (IMCD3) cells transfected with wild type or variant NEK8 were further used to study ciliogenesis, ciliary trafficking, kinase function, and DNA damage responses. Twenty-one affected monoallelic individuals uniformly exhibited cystic kidney disease (mostly neonatal) without consistent extra-kidney manifestations. Recurrent de novo mutations of the NEK8 missense variant p.Arg45Trp, including mosaicism, were seen in ten families. Missense variants elsewhere within the kinase domain (p.Ile150Met and p.Lys157Gln) were also identified. Functional studies demonstrated normal localization of the NEK8 protein to the proximal cilium and no consistent cilia formation defects in patient-derived cells. NEK8-wild type protein and all variant forms of the protein expressed in Nek8 knockout IMCD3 cells were localized to cilia and supported ciliogenesis. However, Nek8 knockout IMCD3 cells expressing NEK8-p.Arg45Trp and NEK8-p.Lys157Gln showed significantly decreased polycystin-2 but normal ANKS6 localization in cilia. Moreover, p.Arg45Trp NEK8 exhibited reduced kinase activity in vitro. In patient derived tubuloids and IMCD3 cells expressing NEK8-p.Arg45Trp, DNA damage signaling was increased compared to healthy passage-matched controls. Thus, we propose a dominant-negative effect for specific heterozygous missense variants in the NEK8 kinase domain as a new cause of PKD.

Indexed as

Polycystic Kidney, Autosomal DominantPolycystic Kidney DiseasesAnimalsCarrier ProteinsCiliaHumansInfant, NewbornKidneyMiceMutationNIMA-Related KinasesProtein Serine-Threonine KinasesSerineTRPP Cation ChannelsANKS6 protein, mouseCarrier ProteinsNEK8 protein, humanNek8 protein, mouseNIMA-Related KinasesProtein Serine-Threonine KinasesSerineTRPP Cation ChannelsciliopathykinaseNEK8polycystic kidney disease

Identifiers

PMID37598857
PMCPMC10592035
OpenAlexW4385973091

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.