Evidence map›Paper›PMID 37598266›Full record

ArticleScientific reports2023

Intracellular trafficking and glycosylation of hydroxyproline-O-glycosylation module in tobacco BY-2 cells is dependent on medium composition and transcriptome analysis.

Uddhab Karki, Paula Perez Sanchez, Sankalpa Chakraborty, Berry Dickey, Jacqueline Vargas Ulloa, Ningning Zhang, Jianfeng Xu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Uddhab KarkiArkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72401, USA.
Paula Perez SanchezDepartment of Biological Sciences, Arkansas State University, Jonesboro, AR, 72401, USA.
Sankalpa ChakrabortyArkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72401, USA.
Berry DickeyDepartment of Biological Sciences, Arkansas State University, Jonesboro, AR, 72401, USA.
Jacqueline Vargas UlloaDepartment of Biological Sciences, Arkansas State University, Jonesboro, AR, 72401, USA.
Ningning ZhangArkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72401, USA.
Jianfeng XuArkansas Biosciences Institute, Arkansas State University, Jonesboro, AR, 72401, USA. jxu@astate.edu.
Arkansas State University · USArkansas Biosciences Institute · US

Funding

Understanding Hesitant AdoptersP20GM103429 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Lawrence E Cornett · 2012 to 2026
$60.9M
Engineering novel designer biologics in plant cells for oral treatment of ulcerative colitisR15DK128757 · NIDDK · ARKANSAS STATE UNIVERSITY · PI XU, JIANFENG · 2021 to 2021
$395k
NIDDK NIH HHS R15 DK128757NIGMS NIH HHS P20 GM103429
6 · The paper itself

Abstract

Expression of recombinant proteins in plant cells with a "designer" hydroxyproline (Hyp)-O-glycosylated peptide (HypGP), such as tandem repeats of a "Ser-Pro" motif, has been shown to boost the secreted protein yields. However, dramatic secretion and Hyp-O-glycosylation of HypGP-tagged proteins can only be achieved when the plant cells were grown in nitrogen-deficient SH medium. Only trace amounts of secreted fusion protein were detected in MS medium. This study aims to gain a deeper understanding of the possible mechanism underlying these results by examining the intracellular trafficking and Hyp-O-glycosylation of enhanced green fluorescent protein (EGFP) fused with a (SP)

Indexed as

NicotianaPlant CellsGene Expression ProfilingGlycosylationHydroxyprolineHydroxyproline

Identifiers

PMID37598266
PMCPMC10439957
OpenAlexW4386001320

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.