Evidence map›Paper›PMID 37597168›Full record

ArticleThe Plant cell2023

Biosynthesis of gibberellin-related compounds modulates far-red light responses in the liverwort Marchantia polymorpha.

Rui Sun, Maiko Okabe, Sho Miyazaki, Toshiaki Ishida, Kiyoshi Mashiguchi, Keisuke Inoue, Yoshihiro Yoshitake, Shohei Yamaoka, Ryuichi Nishihama, Hiroshi Kawaide and 3 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
9.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Evolution of small molecule-mediated regulation of arbuscular mycorrhiza symbiosis.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  11. Cytochromes P450 evolution in the plant terrestrialization context.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  12. Current and future perspectives for enhancing our understanding of the evolution of plant metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  13. Overexpression ofPlants (Basel, Switzerland) · 2024
    Article
  14. Article
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Rui SunGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0001-6599-0488
Maiko OkabeGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0009-0005-4056-8412
Sho MiyazakiInstitute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu, 183-8509,Japan.ORCID 0000-0002-7765-9562
Toshiaki IshidaInstitute for Chemical Research, Kyoto University, Uji 611-0011,Japan.ORCID 0000-0001-8648-0970
Kiyoshi MashiguchiInstitute for Chemical Research, Kyoto University, Uji 611-0011,Japan.ORCID 0000-0002-7234-887X
Keisuke InoueGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0002-9390-0432
Yoshihiro YoshitakeGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0003-0597-5651
Shohei YamaokaGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0003-4154-9967
Ryuichi NishihamaGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0002-7032-732X
Hiroshi KawaideInstitute of Agriculture, Tokyo University of Agriculture and Technology, Tokyo 183-8509,Japan.ORCID 0000-0001-6693-1332
Masatoshi NakajimaDepartment of Applied Biological Chemistry, The University of Tokyo, Tokyo 113-8657,Japan.ORCID 0000-0001-9679-341X
Shinjiro YamaguchiInstitute for Chemical Research, Kyoto University, Uji 611-0011,Japan.ORCID 0000-0002-0786-1757
Takayuki KohchiGraduate School of Biostudies, Kyoto University, Kyoto 606-8502,Japan.ORCID 0000-0002-9712-4872
Kyoto University · JPTokyo University of Agriculture and Technology · JPThe University of Tokyo · JPTokyo University of Science · JP

Funding

International Collaborative Research Program of Institute for Chemical Research, Kyoto University 2020-53JSPS KAKENHI JP17H07424MEXT KAKENHI JP19H05675
6 · The paper itself

Abstract

Gibberellins (GAs) are key phytohormones that regulate growth, development, and environmental responses in angiosperms. From an evolutionary perspective, all major steps of GA biosynthesis are conserved among vascular plants, while GA biosynthesis intermediates such as ent-kaurenoic acid (KA) are also produced by bryophytes. Here, we show that in the liverwort Marchantia polymorpha, KA and GA12 are synthesized by evolutionarily conserved enzymes, which are required for developmental responses to far-red light (FR). Under FR-enriched conditions, mutants of various biosynthesis enzymes consistently exhibited altered thallus growth allometry, delayed initiation of gametogenesis, and abnormal morphology of gamete-bearing structures (gametangiophores). By chemical treatments and liquid chromatography-tandem mass spectrometry (LC-MS/MS) analyses, we confirmed that these phenotypes were caused by the deficiency of some GA-related compounds derived from KA, but not bioactive GAs from vascular plants. Transcriptome analysis showed that FR enrichment induced the up-regulation of genes related to stress responses and secondary metabolism in M. polymorpha, which was largely dependent on the biosynthesis of GA-related compounds. Due to the lack of canonical GA receptors in bryophytes, we hypothesize that GA-related compounds are commonly synthesized in land plants but were co-opted independently to regulate responses to light quality change in different plant lineages during the past 450 million years of evolution.

Indexed as

GibberellinsMarchantiaChromatography, LiquidLightTandem Mass SpectrometryGibberellins

Identifiers

PMID37597168
PMCPMC10615216
OpenAlexW4385999383

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.