Evidence map›Paper›PMID 37597110›Full record

Observational studyAnnals of hematology2023

Dominant-negative type of IKZF1 deletion showed a favorable prognosis in adult B-cell acute lymphoblastic leukemia.

Hiroyuki Kimura, Masahiro Onozawa, Shota Yoshida, Naoki Miyashita, Shota Yokoyama, Toshihiro Matsukawa, Shinsuke Hirabayashi, Hideki Goto, Tomoyuki Endo, Satoshi Oguri and 19 more

Abstract readObservational Study
PubMed Publisher
In one paragraph

Observational study in Annals of hematology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 14 institutions in 1 country.

Hiroyuki KimuraDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Masahiro OnozawaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan. onozawa@med.hokudai.ac.jp.ORCID http://orcid.org/0000-0001-9267-2864
Shota YoshidaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Naoki MiyashitaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Shota YokoyamaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Toshihiro MatsukawaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Shinsuke HirabayashiDepartment of Pediatrics, Hokkaido University Hospital, Sapporo, Japan.
Hideki GotoDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Tomoyuki EndoDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Satoshi OguriDivision of Laboratory and Transfusion Medicine, Hokkaido University Hospital, Sapporo, Japan.
Shinichi FujisawaDivision of Laboratory and Transfusion Medicine, Hokkaido University Hospital, Sapporo, Japan.
Akio MoriBlood Disorders Center, Aiiku Hospital, Sapporo, Japan.
Takeshi KondoBlood Disorders Center, Aiiku Hospital, Sapporo, Japan.
Daisuke HidakaDepartment of Hematology, Sapporo Hokuyu Hospital, Sapporo, Japan.
Kohei OkadaDepartment of Hematology, Sapporo Hokuyu Hospital, Sapporo, Japan.
Shuichi OtaDepartment of Hematology, Sapporo Hokuyu Hospital, Sapporo, Japan.
Yasutaka KakinokiDepartment of Hematology, Asahikawa City Hospital, Asahikawa, Japan.
Yutaka TsutsumiDepartment of Hematology, Hakodate Municipal Hospital, Hakodate, Japan.
Satoshi YamamotoDepartment of Hematology, Sapporo City General Hospital, Sapporo, Japan.
Takuto MiyagishimaDepartment of Hematology, Kushiro Rosai Hospital, Kushiro, Japan.
Junichi HashiguchiDepartment of Internal Medicine, Kitami Red Cross Hospital, Kitami, Japan.
Takahiro NagashimaDepartment of Internal Medicine, Kitami Red Cross Hospital, Kitami, Japan.
Makoto IbataDepartment of Hematology, Sapporo Kosei General Hospital, Sapporo, Japan.
Kentaro WakasaDepartment of Hematology, Obihiro Kosei Hospital, Obihiro, Japan.
Yoshihito HaseyamaDepartment of Hematology, Tonan Hospital, Sapporo, Japan.
Katsuya FujimotoDepartment of Hematology, National Hospital Organization Hokkaido Cancer Center, Sapporo, Japan.
Toshimichi IshiharaDepartment of Hematology, Kin-Ikyo Chuo Hospital, Sapporo, Japan.
Hajime SakaiDepartment of Hematology, Teine Keijinkai Hospital, Sapporo, Japan.
Takanori TeshimaDepartment of Hematology, Hokkaido University Faculty of Medicine, Graduate School of Medicine, Kita 15, Nishi 7, Kita-Ku, Sapporo, 0608638, Japan.
Hokkaido University · JPHokkaido University Hospital · JPSapporo Hokuyu Hospital · JPJapanese Red Cross Hokkaido College of Nursing · JPAsahikawa City Hospital · JPHakodate National Hospital · JPKin-ikyo Chuo Hospital · JPKushiro Rosai Hospital · JPNational Hospital Organization Hokkaido Medical Center · JPObihiro Kosei General Hospital · JPSapporo City General Hospital · JPSapporo Kosei General Hospital · JPTeine Keijinkai Hospital · JPTonan Hospital · JP

Funding

Japan Society for the Promotion of Science 16K09836Japan Society for the Promotion of Science 17K16174
6 · The paper itself

Abstract

IKZF1 deletion is a recurrent genomic alteration in B-cell acute lymphoblastic leukemia (B-ALL) and is divided into dominant-negative (DN) and loss of function (LOF) deletions. The prognostic impact of each deletion has not been fully elucidated. We retrospectively analyzed 117 patients with adult B-ALL including 60 patients with BCR::ABL1-positive B-ALL and 57 patients with BCR::ABL1-negative B-ALL by the fluorescence in situ hybridization (FISH) method for IKZF1 deletion and multiplex PCR for the 4 most common IKZF1 deletions (∆4-7, ∆2-7, ∆2-8, and ∆4-8). Samples, in which IKZF1 deletion was detected by FISH but a specific type of deletion was not identified by the PCR, were categorized as "other." Patients were classified into a DN group that had at least 1 allele of ∆4-7 (n = 23), LOF and other group (n = 40), and wildtype group (n = 54). DN type IKZF1 deletions were found in 33.3% of BCR::ABL1-positive cases and 5.2% of BCR::ABL1-negative cases. LOF and other type IKZF1 deletions were found in 43.4% of BCR::ABL1-positive cases and 24.6% of BCR::ABL1-negative cases. Patients with the DN group showed significantly higher overall survival (OS) than that of the LOF and other and WT groups (P = 0.011). Multivariate analysis including age, WBC counts, complex karyotype, and DN type IKZF1 deletion showed that the DN type of IKZF1 deletion (HR = 0.22, P = 0.013) had a positive impact and age ≥ 65 (HR = 1.92, P = 0.029) had a negative impact on OS. The prognostic impact of IKZF1 deletion depends on the type of deletion and DN type of IKZF1 deletion showed better prognosis in adult B-ALL patients.Clinical trial registration This study was part of a prospective observational study (Hokkaido Leukemia Net, UMIN000048611). It was conducted in compliance with ethical principles based on the Helsinki Declaration and was approved by the institutional review board of Hokkaido University Hospital (#015-0344).

Indexed as

Gene DeletionIkaros Transcription FactorPrecursor B-Cell Lymphoblastic Leukemia-LymphomaAdolescentAdultAgedAged, 80 and overFemaleFusion Proteins, bcr-ablHumansIn Situ Hybridization, FluorescenceMaleMiddle AgedPrognosisRetrospective StudiesSurvival RateFusion Proteins, bcr-ablIkaros Transcription FactorIKZF1 protein, humanAcute lymphoblastic leukemiaDominant-negativeFluorescence in situ hybridization (FISH)Hokkaido Leukemia Net (HLN)IKAROSIKZF1 deletion

Identifiers

PMID37597110
OpenAlexW4386001899

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.