Evidence map›Paper›PMID 37594988›Full record

ArticlePLoS biology2023

A pathogen-specific isotope tracing approach reveals metabolic activities and fluxes of intracellular Salmonella.

Karin Mitosch, Martin Beyß, Prasad Phapale, Bernhard Drotleff, Katharina Nöh, Theodore Alexandrov, Kiran R Patil, Athanasios Typas

Abstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Identification of genes promoting fitness of a plant-associatedApplied and environmental microbiology · 2026
    Article
  2. Review
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  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Improved MALDI-MS Imaging of Polar andAnalytical chemistry · 2025
    Article
  10. Article
  11. Cytoplasmic MgProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Karin MitoschGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-9086-3277
Martin BeyßInstitute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany.
Prasad PhapaleMetabolomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-9487-597X
Bernhard DrotleffMetabolomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.
Katharina NöhInstitute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, Germany.ORCID 0000-0002-5407-2275
Theodore AlexandrovMetabolomics Core Facility, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0001-9464-6125
Kiran R PatilStructural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-6166-8640
Athanasios TypasGenome Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID 0000-0002-0797-9018

Funding

European Research Council 773089
6 · The paper itself

Abstract

Pathogenic bacteria proliferating inside mammalian host cells need to rapidly adapt to the intracellular environment. How they achieve this and scavenge essential nutrients from the host has been an open question due to the difficulties in distinguishing between bacterial and host metabolites in situ. Here, we capitalized on the inability of mammalian cells to metabolize mannitol to develop a stable isotopic labeling approach to track Salmonella enterica metabolites during intracellular proliferation in host macrophage and epithelial cells. By measuring label incorporation into Salmonella metabolites with liquid chromatography-mass spectrometry (LC-MS), and combining it with metabolic modeling, we identify relevant carbon sources used by Salmonella, uncover routes of their metabolization, and quantify relative reaction rates in central carbon metabolism. Our results underline the importance of the Entner-Doudoroff pathway (EDP) and the phosphoenolpyruvate carboxylase for intracellularly proliferating Salmonella. More broadly, our metabolic labeling strategy opens novel avenues for understanding the metabolism of pathogens inside host cells.

Indexed as

SalmonellaSalmonella entericaAnimalsCarbonChromatography, LiquidIsotopesMammalsCarbonIsotopes

Identifiers

PMID37594988
PMCPMC10468081

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.