Evidence map›Paper›PMID 37592747›Full record

ReviewNucleic acids research2023

Plasmids pick a bacterial partner before committing to conjugation.

Gad Frankel, Sophia David, Wen Wen Low, Chloe Seddon, Joshua L C Wong, Konstantinos Beis

Erratum issuedOpen access · goldAbstract readReview
In one paragraph

Review in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  10. Article
  11. Conjugative delivery of toxin genesJournal of bacteriology · 2025
    Article
  12. The extended mobility of plasmids.Nucleic acids research · 2025
    Review
  13. Cryo-EM structure of the conjugation H-pilus reveals the cyclic nature of the TrhA pilin.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. Article
  15. Article
  16. Clonal dissemination of carbapenem-resistant ST477Frontiers in cellular and infection microbiology · 2025
    Article
  17. Article
  18. Dietary zinc supplementation inhibits bacterial plasmid conjugationApplied and environmental microbiology · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Gad FrankelDepartment of Life Sciences, Imperial College, London, UK.ORCID 0000-0002-0046-1363
Sophia DavidCentre for Genomic Pathogen Surveillance, Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, Oxford, UK.
Wen Wen LowDepartment of Life Sciences, Imperial College, London, UK.
Chloe SeddonDepartment of Life Sciences, Imperial College, London, UK.
Joshua L C WongDepartment of Life Sciences, Imperial College, London, UK.
Konstantinos BeisDepartment of Life Sciences, Imperial College, London, UK.
Imperial College London · GBRutherford Appleton Laboratory · GBUniversity of Oxford · GB

Funding

Biotechnology and Biological Sciences Research CouncilWellcome TrustWellcome Trust 224282/Z/21/Z
6 · The paper itself

Abstract

Bacterial conjugation was first described by Lederberg and Tatum in the 1940s following the discovery of the F plasmid. During conjugation a plasmid is transferred unidirectionally from one bacterium (the donor) to another (the recipient), in a contact-dependent manner. Conjugation has been regarded as a promiscuous mechanism of DNA transfer, with host range determined by the recipient downstream of plasmid transfer. However, recent data have shown that F-like plasmids, akin to tailed Caudovirales bacteriophages, can pick their host bacteria prior to transfer by expressing one of at least four structurally distinct isoforms of the outer membrane protein TraN, which has evolved to function as a highly sensitive sensor on the donor cell surface. The TraN sensor appears to pick bacterial hosts by binding compatible outer membrane proteins in the recipient. The TraN variants can be divided into specialist and generalist sensors, conferring narrow and broad plasmid host range, respectively. In this review we discuss recent advances in our understanding of the function of the TraN sensor at the donor-recipient interface, used by F-like plasmids to select bacterial hosts within polymicrobial communities prior to DNA transfer.

Indexed as

BacteriaConjugation, GeneticPlasmidsBacterial ProteinsDNA, BacterialF FactorMembrane ProteinsBacterial ProteinsDNA, BacterialMembrane Proteins

Identifiers

PMID37592747
PMCPMC10516633
OpenAlexW4385968857

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.