Evidence map›Paper›PMID 37592133›Full record

ArticleJournal of human genetics2023

Complete SAMD12 repeat expansion sequencing in a four-generation BAFME1 family with anticipation.

Takeshi Mizuguchi, Tomoko Toyota, Eriko Koshimizu, Shinichi Kameyama, Hiromi Fukuda, Naomi Tsuchida, Yuri Uchiyama, Kohei Hamanaka, Atsushi Fujita, Kazuharu Misawa and 3 more

Abstract read
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In one paragraph

Article in Journal of human genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Takeshi MizuguchiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan. tmizu@yokohama-cu.ac.jp.ORCID http://orcid.org/0000-0003-4998-1244
Tomoko ToyotaDepartment of Neurology, University of Occupational and Environmental Health School of Medicine, Kitakyushu, 807-8555, Japan.
Eriko KoshimizuDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.ORCID http://orcid.org/0000-0001-9947-3315
Shinichi KameyamaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Hiromi FukudaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Naomi TsuchidaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.ORCID http://orcid.org/0000-0001-7203-884X
Yuri UchiyamaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.ORCID http://orcid.org/0000-0002-4540-5277
Kohei HamanakaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Atsushi FujitaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.
Kazuharu MisawaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.ORCID http://orcid.org/0000-0002-6277-4330
Satoko MiyatakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan.ORCID http://orcid.org/0000-0001-7587-5168
Hiroaki AdachiDepartment of Neurology, University of Occupational and Environmental Health School of Medicine, Kitakyushu, 807-8555, Japan.ORCID http://orcid.org/0000-0002-9302-4663
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, Yokohama, 236-0004, Japan. naomat@yokohama-cu.ac.jp.ORCID http://orcid.org/0000-0001-9846-6500
Yokohama City University · JPYokohama City University Hospital · JPUniversity of Occupational and Environmental Health Japan · JP

Funding

Japan Agency for Medical Research and Development (AMED) JP22ek0109486Japan Agency for Medical Research and Development (AMED) JP22ek0109493Japan Agency for Medical Research and Development (AMED) JP22ek0109549MEXT | Japan Society for the Promotion of Science (JSPS) 21K15704MEXT | Japan Society for the Promotion of Science (JSPS) JP20K07316MEXT | Japan Society for the Promotion of Science (JSPS) JP21K07869MEXT | Japan Society for the Promotion of Science (JSPS) JP22K15646MEXT | Japan Society for the Promotion of Science (JSPS) JP22K15901MEXT | Japan Society for the Promotion of Science (JSPS) JP23H02829MEXT | Japan Society for the Promotion of Science (JSPS) JP23H02877MEXT | Japan Society for the Promotion of Science (JSPS) JP23K07229MEXT | Japan Society for the Promotion of Science (JSPS) JP23K15353
6 · The paper itself

Abstract

Benign adult familial myoclonic epilepsy type 1 (BAFME1) is an autosomal dominant, adult-onset neurological disease caused by SAMD12 repeat expansion. In BAFME1, anticipation, such as the earlier onset of tremor and/or seizures in the next generation, was reported. This could be explained by intergenerational repeat instability, leading to larger expansions in successive generations. We report a four-generation BAFME1-affected family with anticipation. Using Nanopore long-read sequencing, detailed information regarding the sizes, configurations, and compositions of the expanded SAMD12 repeats across generations was obtained. Unexpectedly, a grandmother-mother-daughter triad showed similar repeat structures but with slight repeat expansions, despite quite variable age of onset of seizures (range: 52-14 years old), implying a complex relationship between the SAMD12 repeat expansion sequence and anticipation. This study suggests that different factor(s) from repeat expansion could modify the anticipation in BAFME1.

Indexed as

Epilepsies, MyoclonicHumansPedigreeSeizures

Identifiers

PMID37592133
OpenAlexW4385901976

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.