Evidence map›Paper›PMID 37589022›Full record

ArticlePhenomics (Cham, Switzerland)2023

DBLiPro: A Database for Lipids and Proteins in Human Lipid Metabolism.

Qian Wu, Yuanyuan Huang, Xiangya Kong, Ben Jia, Xiaoting Lu, Yunqin Chen, Zechi Huang, Yuan-Yuan Li, Wentao Dai

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Phenomics (Cham, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Qian Wu *NHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0002-1164-6582
Yuanyuan Huang *Beijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 China.ORCID 0000-0002-6732-2835
Xiangya Kong *Beijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 China.ORCID 0000-0001-9230-878X
Ben JiaNHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0001-5859-8242
Xiaoting LuNHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0002-4720-8461
Yunqin ChenNHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0002-8619-0890
Zechi HuangBeijing Cloudna Technology Co., Ltd., No. 53, Yanqi Street, Beijing, 100101 China.ORCID 0000-0001-5454-5733
Yuan-Yuan LiNHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0001-8755-4695
Wentao DaiNHC Key Laboratory of Reproduction Regulation & Shanghai-MOST Key Laboratory of Health and Disease Genomics, Shanghai Institute for Biomedical and Pharmaceutical Technologies (SIBPT), Fudan University, No. 779, Old Hu Min Road, Shanghai, 200237 China.ORCID 0000-0002-0762-919X
Fudan University · CNBeijing YouAn Hospital · CNShanghai Jiao Tong University · CN

Funding

CSRD VA I01 CX002022
6 · The paper itself

Abstract

To help researchers in the field of biology, medicine, chemistry, and materials science to use lipidomic data conveniently, there is an urgent need to develop a platform that provides a systematic knowledgebase of human lipid metabolism and lipidome-centric omics analysis tools. DBLiPro is a user-friendly webserver allowing for access to human metabolism-related lipids and proteins knowledge database and an interactive bioinformatics integrative analysis workflow for lipidomics, transcriptomics, and proteomics data. In DBLiPro, there are 3109 lipid-associated proteins (LAPs) and 2098 lipid metabolites in the knowledge base section, which were obtained from Uniprot, Kyoto Encyclopedia of Genes and Genomes (KEGG) and were further annotated by information from other public resources in the knowledge base section, such as RaftProt and PubChem. DBLiPro offers a step-by-step interactive analysis workflow for lipidomics, transcriptomics, proteomics, and their integrating multi-omics analysis focusing on the human lipid metabolism. In summary, DBLiPro is capable of helping users discover key molecules (lipids and proteins) in human lipid metabolism and investigate lipid-protein functions underlying mechanisms based on their own omics data. The DBLiPro is freely available at http://lipid.cloudna.cn/home.

Indexed as

DatabaseHuman lipid metabolismLipidLipid-associated proteinsOmics

Identifiers

PMID37589022
PMCPMC10425311
OpenAlexW4376645499

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.