Evidence map›Paper›PMID 37588411›Full record

ArticleJournal of extracellular biology2023

Src family kinases engage differential pathways for encapsulation into extracellular vesicles.

Chenming Ye, Cade Gosser, Ethan Daniel Runyon, Junyi Zha, Jingwen Cai, Zanna Beharry, Catherine Bowes Rickman, Mikael Klingeborn, Yutao Liu, Jin Xie and 1 more

Erratum issuedOpen access · diamondAbstract read
In one paragraph

Article in Journal of extracellular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Chenming YeDepartment of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia Athens, Athens, Georgia 30602.
Cade GosserDepartment of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia Athens, Athens, Georgia 30602.
Ethan Daniel RunyonDepartment of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia Athens, Athens, Georgia 30602.
Junyi ZhaDepartment of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia Athens, Athens, Georgia 30602.
Jingwen CaiDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, Georgia 30912.
Zanna BeharryDepartment of Chemical and Physical Sciences, University of Virgin Islands, St. Thomas, VI 00802.
Catherine Bowes RickmanDepartment of Ophthalmology, Duke University, Durham, NC 27710.
Mikael KlingebornDepartment of Ophthalmology, Duke University, Durham, NC 27710.
Yutao LiuDepartment of Cellular Biology and Anatomy, Augusta University, Augusta, Georgia 30912.
Jin XieDepartment of Chemistry, University of Georgia Athens, Athens, Georgia 30602.
Houjian CaiDepartment of Pharmaceutical and Biomedical Sciences, College of Pharmacy, University of Georgia Athens, Athens, Georgia 30602.
University of Georgia · USAugusta University · USDuke University · USUniversity of the Virgin Islands · VI

Funding

VISION RESEARCHP30EY005722 · NEI · DUKE UNIVERSITY · PI Vadim Y Arshavsky · 1985 to 2026
$19.3M
Module 3: Gene Expression/ProteomicsP30EY031631 · NEI · AUGUSTA UNIVERSITY · PI Xingjun Fan · 2020 to 2026
$3.6M
Complement factor H modulates lipoprotein clearance in AMDR01EY031748 · NEI · DUKE UNIVERSITY · PI BOWES RICKMAN, CATHERINE · 2020 to 2024
$2.8M
Heparan Sulfate in Prostate CancerU01CA225784 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI CAI, HOUJIAN, WANG, LIANCHUN · 2018 to 2023
$2.6M
The development of novel radiation-sensitizer based on ultra-small carbon dotsR01CA247769 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, ZIBO, XIE, JIN · 2020 to 2024
$2.5M
Development of a novel biodegradable inorganic nanoparticle therapeutic for cancerR01CA257851 · NCI · UNIVERSITY OF GEORGIA · PI KIM, WILLIAM Y., LI, ZIBO · 2021 to 2024
$2.1M
Targeting myristoylation of Src family kinases for inhibition of prostate tumorigenesisR01CA172495 · NCI · UNIVERSITY OF GEORGIA · PI CAI, HOUJIAN · 2013 to 2017
$1.7M
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
The Role of RPE-derived Exosomes in Deposit Formation and ECM ModulationR21EY033057 · NEI · MC LAUGHLIN RESEARCH INSTITUTE · PI KLINGEBORN, MIKAEL · 2021 to 2022
$447k
Blocking TMPRSS2 expression for prevention of SARS-CoV-2 infectionR21AI157831 · NIAID · UNIVERSITY OF GEORGIA · PI CAI, HOUJIAN · 2021 to 2023
$415k
Extracellular vesicles encapsulating CRISPR machinery for treatment of SARS-CoV-2 infectionR21AI171944 · NIAID · UNIVERSITY OF GEORGIA · PI CAI, HOUJIAN · 2023 to 2024
$406k
NCI NIH HHS R01 CA172495NCI NIH HHS R01 CA247769NCI NIH HHS R01 CA257851NCI NIH HHS U01 CA225784NEI NIH HHS P30 EY005722NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY031748NEI NIH HHS R21 EY028671NEI NIH HHS R21 EY033057NIAID NIH HHS R21 AI157831NIAID NIH HHS R21 AI171944
6 · The paper itself

Abstract

Extracellular vesicles (EVs) are heterogeneous biological nanoparticles secreted by all cell types. Identifying the proteins preferentially encapsulated in secreted EVs will help understand their heterogeneity. Src family kinases including Src and Fyn are a group of tyrosine kinases with fatty acylation modifications and/or multiple lysine residues (contributing charge interaction) at their N-terminus. Here, we demonstrate that Src and Fyn kinases were preferentially encapsulated in EVs and fatty acylation including myristoylation and palmitoylation facilitated their encapsulation. Genetic loss or pharmacological inhibition of myristoylation suppressed Src and/or Fyn kinase levels in EVs. Similarly, loss of palmitoylation reduced Fyn levels in EVs. Additionally, mutation of lysine at sites 5, 7, and 9 of Src kinase also inhibited the encapsulation of myristoylated Src into EVs. Knockdown of TSG101, which is a protein involved in the endosomal sorting complexes required for transport (ESCRT) protein complex mediated EVs biogenesis and led to a reduction of Src levels in EVs. In contrast, filipin III treatment, which disturbed the lipid raft structure, reduced Fyn kinase levels, but not Src kinase levels in EVs. Finally, elevated levels of Src protein were detected in the serum EVs of host mice carrying constitutively active Src-mediated prostate tumors

Indexed as

extracellular vesiclesheterogeneityMyristoylationpalmitoylationSrc family kinases

Identifiers

PMID37588411
PMCPMC10426749
OpenAlexW4381930410

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.