Evidence map›Paper›PMID 37586773›Full record

ArticleJournal for immunotherapy of cancer2023

Immune dysfunction revealed by digital spatial profiling of immuno-oncology markers in progressive stages of renal cell carcinoma and in brain metastases.

David A Schoenfeld, Myrto Moutafi, Sandra Martinez, Dijana Djureinovic, Ross D Merkin, Adebowale Adeniran, David A Braun, Sabina Signoretti, Toni K Choueiri, Fabio Parisi and 5 more

Open access · goldAbstract read
In one paragraph

Article in Journal for immunotherapy of cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 16 citations in OpenAlex.

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  6. BCL-XbioRxiv : the preprint server for biology · 2025
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  17. Multiplex protein imaging in tumour biology.Nature reviews. Cancer · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

David A SchoenfeldSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0002-5202-3744
Myrto MoutafiDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0002-9314-3187
Sandra MartinezDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.
Dijana DjureinovicSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.
Ross D MerkinSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.
Adebowale AdeniranDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.
David A BraunSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0003-4543-5553
Sabina SignorettiDepartment of Pathology, Brigham and Women's Hospital, Boston, Massachusetts, USA.
Toni K ChoueiriDepartment of Medical Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA.ORCID 0000-0002-9201-3217
Fabio ParisiSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.
Michael HurwitzSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.
David L RimmDepartment of Pathology, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0001-5820-4397
Wei WeiDepartment of Biostatistics, Yale University School of Public Health, New Haven, Connecticut, USA.
Lucia JilaveanuSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA.
Harriet M KlugerSchool of Medical Oncology, Yale School of Medicine, New Haven, Connecticut, USA Harriet.Kluger@Yale.edu.ORCID 0000-0002-4932-9873
Yale University · USBrigham and Women's Hospital · USDana-Farber Cancer Institute · US

Funding

VectorP30CA006516 · NCI · DANA-FARBER CANCER INSTITUTE · PI Irene M. Ghobrial · 1985 to 2026
$330.6M
Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Treating the P13-Kinase/AKTP50CA101942 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI David McDermott · 2003 to 2026
$53.4M
Yale SPORE in Skin CancerP50CA121974 · NCI · YALE UNIVERSITY · PI MARCUS W BOSENBERG, Harriet M. Kluger · 2006 to 2026
$43.9M
YALE CANCER CENTER CALABRESI IMMUNO-ONCOLOGY TRAINING PROGRAMK12CA215110 · NCI · YALE UNIVERSITY · PI Harriet M. Kluger · 2018 to 2026
$6.1M
Tissue-based biomarkers of anti-PD-1-based therapy in metastatic renal cell carcinomaR01CA266424 · NCI · DANA-FARBER CANCER INST · PI Toni Choueiri, SABINA SIGNORETTI · 2022 to 2026
$3.6M
Yale Cancer Center Advanced Training Program for Physician-Scientists (YCC-ATPP)T32CA233414 · NCI · YALE UNIVERSITY · PI Eric P. Winer · 2019 to 2026
$3.2M
Dual-isotope SPECT imaging and immunophenotyping of immune cells to determine response to immunotherapyR01CA269349 · NCI · YALE UNIVERSITY · PI Harriet M. Kluger, Bernadette Marquez-Nostra · 2023 to 2026
$2.6M
Renalase inhibition for treatment of unresectable melanomaR01CA216846 · NCI · YALE UNIVERSITY · PI DESIR, GARY V., KLUGER, HARRIET M. · 2017 to 2021
$2.4M
Immune Therapy for Brain MetastasisR01CA269286 · NCI · YALE UNIVERSITY · PI Lucia Beatrice Jilaveanu, Harriet M. Kluger · 2023 to 2026
$2.2M
NCATS NIH HHS UL1 TR001863NCI NIH HHS K12 CA215110NCI NIH HHS P30 CA006516NCI NIH HHS P50 CA101942NCI NIH HHS P50 CA121974NCI NIH HHS R01 CA216846NCI NIH HHS R01 CA266424NCI NIH HHS R01 CA269286NCI NIH HHS R01 CA269349NCI NIH HHS T32 CA233414
6 · The paper itself

Abstract

backgroundThe tumor microenvironment (TME) contributes to cancer progression and treatment response to therapy, including in renal cell carcinoma (RCC). Prior profiling studies, including single-cell transcriptomics, often involve limited sample sizes and lack spatial orientation. The TME of RCC brain metastases, a major cause of morbidity, also remains largely uncharacterized.

methodsWe performed digital spatial profiling on the NanoString GeoMx platform using 52 validated immuno-oncology markers on RCC tissue microarrays representing progressive stages of RCC, including brain metastases. We profiled 76 primary tumors, 27 adjacent histologically normal kidney samples, and 86 metastases, including 24 brain metastases.

resultsWe observed lower immune checkpoint (TIM-3 and CTLA-4), cytolytic (GZMA and GZMB), and T cell activation (CD25) protein expression in metastases compared with primary tumors in two separate cohorts. We also identified changes in macrophages in metastases, with brain metastases-susceptible patients showing less M1-like, inflammatory macrophage markers (HLA-DR and CD127) in metastatic samples. A comparison of brain metastases to extracranial metastases revealed higher expression of the anti-apoptotic, BCL-2-family protein BCL-XL and lower expression of the innate immune activator STING in brain metastases. Lower TIM-3 and CD40 in the TME of brain metastases appear to be associated with longer survival, a finding that requires further validation.

conclusionsCompared with primary tumors, RCC metastases, including brain metastases, express lower levels of numerous markers of immune activation and current or investigational therapeutic targets. Our findings may have important implications for designing future biomarker and treatment studies and may aid in development of brain metastases-specific therapies.

Indexed as

Brain NeoplasmsCarcinoma, Renal CellImmune System DiseasesKidney NeoplasmsHepatitis A Virus Cellular Receptor 2HumansMedical OncologyTumor MicroenvironmentHepatitis A Virus Cellular Receptor 2Biomarkers, TumorBrain NeoplasmsImmunotherapyRenal Cell CarcinomaTumor Microenvironment

Identifiers

PMID37586773
PMCPMC10432651
OpenAlexW4385872065

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.