Evidence map›Paper›PMID 37586370›Full record

ArticleCell chemical biology2023

Multimodal, broadly neutralizing antibodies against SARS-CoV-2 identified by high-throughput native pairing of BCRs from bulk B cells.

Gladys J Keitany, Benjamin E R Rubin, Meghan E Garrett, Andrea Musa, Jeff Tracy, Yu Liang, Peter Ebert, Amanda J Moore, Jonathan Guan, Erica Eggers and 25 more

Open access · hybridAbstract read
In one paragraph

Article in Cell chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 2 institutions in 1 country.

Gladys J KeitanyAdaptive Biotechnologies, Seattle, WA 98109, USA.
Benjamin E R RubinAdaptive Biotechnologies, Seattle, WA 98109, USA.
Meghan E GarrettAdaptive Biotechnologies, Seattle, WA 98109, USA.
Andrea MusaAdaptive Biotechnologies, Seattle, WA 98109, USA.
Jeff TracyAdaptive Biotechnologies, Seattle, WA 98109, USA.
Yu LiangAdaptive Biotechnologies, Seattle, WA 98109, USA.
Peter EbertAdaptive Biotechnologies, Seattle, WA 98109, USA.
Amanda J MooreAdaptive Biotechnologies, Seattle, WA 98109, USA.
Jonathan GuanAdaptive Biotechnologies, Seattle, WA 98109, USA.
Erica EggersAdaptive Biotechnologies, Seattle, WA 98109, USA.
Ninnia LescanoAdaptive Biotechnologies, Seattle, WA 98109, USA.
Ryan BrownAdaptive Biotechnologies, Seattle, WA 98109, USA.
Adria CarboAdaptive Biotechnologies, Seattle, WA 98109, USA.
Hussein Al-AsadiAdaptive Biotechnologies, Seattle, WA 98109, USA.
Travers ChingAdaptive Biotechnologies, Seattle, WA 98109, USA.
Austin DayAdaptive Biotechnologies, Seattle, WA 98109, USA.
Rebecca HarrisAdaptive Biotechnologies, Seattle, WA 98109, USA.
Charles LinkemAdaptive Biotechnologies, Seattle, WA 98109, USA.
Dimitry PopovAdaptive Biotechnologies, Seattle, WA 98109, USA.
Courtney WilkinsAdaptive Biotechnologies, Seattle, WA 98109, USA.
Lianqu LiGenScript ProBio Biotech, Nanjing, Jiangsu Province, China.
Jiao WangGenScript ProBio Biotech, Nanjing, Jiangsu Province, China.
Chuanxin LiuGenScript ProBio Biotech, Nanjing, Jiangsu Province, China.
Li ChenGenScript ProBio Biotech, Nanjing, Jiangsu Province, China.
Jennifer N DinesAdaptive Biotechnologies, Seattle, WA 98109, USA.
Caroline AtyeoRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Galit AlterRagon Institute of MGH, MIT and Harvard, Cambridge, MA 02139, USA.
Lance BaldoAdaptive Biotechnologies, Seattle, WA 98109, USA.
Anna SherwoodAdaptive Biotechnologies, Seattle, WA 98109, USA.
Bryan HowieAdaptive Biotechnologies, Seattle, WA 98109, USA.
Mark KlingerAdaptive Biotechnologies, Seattle, WA 98109, USA.
Erik YuskoAdaptive Biotechnologies, Seattle, WA 98109, USA.
Harlan S RobinsAdaptive Biotechnologies, Seattle, WA 98109, USA.
Sharon BenzenoAdaptive Biotechnologies, Seattle, WA 98109, USA.
Amy E GilbertAdaptive Biotechnologies, Seattle, WA 98109, USA. Electronic address: agilbert@adaptivebiotech.com.
Adaptive Biotechnologies (United States) · USRagon Institute of MGH, MIT and Harvard · US

Funding

Specific and Broadly Active Monoclonal Antibody Therapeutics Against The FilovirusesU19AI142790 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI SAPHIRE, ERICA OLLMANN · 2019 to 2023
$40.0M
NIAID NIH HHS U19 AI142790
6 · The paper itself

Abstract

TruAB Discovery is an approach that integrates cellular immunology, high-throughput immunosequencing, bioinformatics, and computational biology in order to discover naturally occurring human antibodies for prophylactic or therapeutic use. We adapted our previously described pairSEQ technology to pair B cell receptor heavy and light chains of SARS-CoV-2 spike protein-binding antibodies derived from enriched antigen-specific memory B cells and bulk antibody-secreting cells. We identified approximately 60,000 productive, in-frame, paired antibody sequences, from which 2,093 antibodies were selected for functional evaluation based on abundance, isotype and patterns of somatic hypermutation. The exceptionally diverse antibodies included RBD-binders with broad neutralizing activity against SARS-CoV-2 variants, and S2-binders with broad specificity against betacoronaviruses and the ability to block membrane fusion. A subset of these RBD- and S2-binding antibodies demonstrated robust protection against challenge in hamster and mouse models. This high-throughput approach can accelerate discovery of diverse, multifunctional antibodies against any target of interest.

Indexed as

COVID-19SARS-CoV-2AnimalsAntibodies, NeutralizingAntibodies, ViralBroadly Neutralizing AntibodiesHumansMiceSpike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralBroadly Neutralizing AntibodiesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2AntibodiesAntibody secreting cellsBCR pairSEQBroadly neutralizing antibodiesCell fusionHigh throughput sequencingS2 antibodiesSARS CoV-2TruAB Discovery

Identifiers

PMID37586370
PMCPMC10659930
OpenAlexW4385841322

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.