Evidence map›Paper›PMID 37582696›Full record

ArticleBMC genomics2023

Mapping of major QTL and candidate gene analysis for hull colour in foxtail millet (Setaria italica (L.) P. Beauv.).

Shuqing Guo, Shaohua Chai, Yan Guo, Xing Shi, Fei Han, Ting Qu, Lu Xing, Qinghua Yang, Jinfeng Gao, Xiaoli Gao and 3 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Shuqing GuoState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Shaohua ChaiState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Yan GuoState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Xing ShiState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Fei HanState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Ting QuInstitute of Millet Crops, Anyang Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Lu XingInstitute of Millet Crops, Anyang Academy of Agricultural Sciences, Anyang, 455000, Henan, China.
Qinghua YangState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Jinfeng GaoState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Xiaoli GaoState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Baili FengState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China.
Hui SongInstitute of Millet Crops, Anyang Academy of Agricultural Sciences, Anyang, 455000, Henan, China. 837181622@qq.com.
Pu YangState Key Laboratory of Crop Stress Biology in Arid Areas, College of Agronomy, Northwest A & F University, Taicheng Road, Yangling, 712100, Shaanxi, China. yangpu5532@hotmail.com.
Northwest A&F University · CNAnyang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHull colour is an important morphological marker for selection in seed production of foxtail millet. However, the molecular mechanisms underlying hull colour variation remain unknown.

resultsAn F

conclusionsThis is the first study to use an inheritance model and QTL mapping to determine the genetic mechanisms of hull colour trait in foxtail millet. We identified six major environmentally stable QTL and predicted five potential candidate genes to be associated with hull colour. These results advance the current understanding of the genetic mechanisms underlying hull colour traits in foxtail millet and provide additional resources for application in genomics-assisted breeding and potential isolation and functional characterization of the candidate genes.

Indexed as

Carcinoma, HepatocellularLiver NeoplasmsSetaria PlantChromosome MappingColorGenetic Association StudiesPlant BreedingQuantitative Trait LociCandidate genesFoxtail milletHull colourMixed inheritance analysisQTL

Identifiers

PMID37582696
PMCPMC10428602
OpenAlexW4385839847

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.