Evidence map›Paper›PMID 37581865›Full record

ArticleMarine biotechnology (New York, N.Y.)2023

Circulating MicroRNAs Indicative of Sex and Stress in the European Seabass (Dicentrarchus labrax): Toward the Identification of New Biomarkers.

Camille Houdelet, Eva Blondeau-Bidet, Mathilde Estevez-Villar, Xavier Mialhe, Sophie Hermet, François Ruelle, Gilbert Dutto, Aline Bajek, Julien Bobe, Benjamin Geffroy

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Camille HoudeletMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Palavas-Les-Flots, France.ORCID https://orcid.org/0000-0002-0836-5202
Eva Blondeau-BidetMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France.ORCID https://orcid.org/0000-0002-8409-3544
Mathilde Estevez-VillarMGX-Montpellier GenomiX, Institut de Génomique Fonctionnelle, Montpellier, France.
Xavier MialheMGX-Montpellier GenomiX, Institut de Génomique Fonctionnelle, Montpellier, France.ORCID https://orcid.org/0000-0002-0816-7898
Sophie HermetMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France.ORCID https://orcid.org/0000-0003-2868-4734
François RuelleMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Palavas-Les-Flots, France.
Gilbert DuttoMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Palavas-Les-Flots, France.ORCID https://orcid.org/0000-0002-3659-7713
Aline BajekEcloserie Marine de Gravelines-Ichtus, Voie des Enrochements, F-59820, Gravelines, France.
Julien BobeINRAE, UR1037, Fish Physiology and Genomic laboratory, F-35000, Rennes, France.ORCID https://orcid.org/0000-0002-9355-8227
Benjamin GeffroyMARBEC Univ Montpellier, CNRS, Ifremer, IRD, Montpellier, France. Benjamin.Geffroy@ifremer.fr.ORCID https://orcid.org/0000-0001-6120-1103
Centre National de la Recherche Scientifique · FRMontpellier GenomiX · FRInstitut des Corps Gras · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FR

Funding

European Maritime and Fisheries Fund MiSS n°20-00070
6 · The paper itself

Abstract

MicroRNAs (miRNAs) constitute a new category of biomarkers. Studies on miRNAs in non-mammalian species have drastically increased in the last few years. Here, we explored the use of miRNAs as potential, poorly invasive markers, to identify sex and characterize acute stress in fish. The European seabass (Dicentrarchus labrax) was chosen as a model because of its rapid response to stress and its specific sex determination system, devoid of sexual chromosomes. We performed a small RNA-sequencing analysis in the blood plasma of male and female European seabass (mature and immature) as well as in the blood plasma of juveniles submitted to an acute stress and sampled throughout the recovery period (at 0 h, 0.5 h, 1.5 h and 6 h). In immature individuals, both miR-1388-3p and miR-7132a-5p were up-regulated in females, while miR-499a-5p was more abundant in males. However, no miRNAs were found to be differentially expressed between sexes in the blood plasma of mature individuals. For the acute stress analysis, five miRNAs (miR-155-5p, miR-200a-3p, miR-205-1-5p, miR-143-3p, and miR-223-3p) followed cortisol production over time. All miRNAs identified were tested and validated by RT-qPCR on sequenced samples. A complementary analysis on the 3'UTR sequences of the European seabass allowed to predict potential mRNA targets, some of them being particularly relevant regarding stress regulation, e.g., the glucocorticoid receptor 1 and the mineralocorticoid receptor. The present study provides new avenues and recommendations on the use of miRNAs as biomarkers of sex or stress of the European seabass, with potential application on other fish species.

Indexed as

BassCirculating MicroRNAMicroRNAsAnimalsBase SequenceBiomarkersFemaleMaleBiomarkersCirculating MicroRNAMicroRNAsBlood plasmaCortisolFishGlucocorticoid receptormiRNAsSex differentiation

Identifiers

PMID37581865
OpenAlexW4385827252

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.