Evidence map›Paper›PMID 37580657›Full record

Trial reportBMC infectious diseases2023

Prevalence and genotypes distribution of virus hepatitis B and hepatitis delta virus in chronic liver diseases in Kazakhstan.

Bibigul S Ilyassova, Balzhan Abzhaparova, Dariga S Smailova, Aidos Bolatov, Bolatbek Baymakhanov, Vyacheslav Beloussov, Maxim Solomadin, Kunsulu Shamsivaliyeva, Gulnara Alpysbayava, Gaukhar Issakova and 4 more

Registry-linked trialOpen access · goldAbstract readClinical Trial
In one paragraph

Trial report in BMC infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05095181 (Preventive and Personalized Medicine), which is not on this map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05095181 completednot on this map

Preventive and Personalized Medicine (2021-2023)

TypeobservationalSponsorAsfendiyarov Kazakh National Medical UniversityRan2021 to 2023Enrolled1,000ConditionsLiver CirrhosisArmsSNP analysis of the DNA
3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Bibigul S IlyassovaJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0003-4468-593X
Balzhan AbzhaparovaJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan. balzhan.gastro@mail.ru.ORCID http://orcid.org/0000-0001-9790-8151
Dariga S SmailovaAsfendiyarov Kazakh National Medical University, Almaty, Kazakhstan.ORCID http://orcid.org/0000-0002-7152-7104
Aidos BolatovAstana Medical University, Astana, Kazakhstan.ORCID http://orcid.org/0000-0002-5390-4623
Bolatbek BaymakhanovJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0002-9839-6853
Vyacheslav BeloussovMolecular Genetics Laboratory "TreeGene", Almaty, Kazakhstan.ORCID http://orcid.org/0000-0003-1922-156X
Maxim SolomadinKaraganda Medical University, Karaganda, Kazakhstan.ORCID http://orcid.org/0000-0003-4219-1055
Kunsulu ShamsivaliyevaJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0003-1569-3850
Gulnara AlpysbayavaMolecular Genetics Laboratory "TreeGene", Almaty, Kazakhstan.ORCID http://orcid.org/0000-0003-1869-279X
Gaukhar IssakovaJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0002-1098-6825
Joanna GranicaMolecular Genetics Laboratory "TreeGene", Almaty, Kazakhstan.ORCID http://orcid.org/0000-0002-4739-5543
Dina MukushkinaMolecular Genetics Laboratory "TreeGene", Almaty, Kazakhstan.ORCID http://orcid.org/0000-0001-9506-3378
Inkar Y SagatovJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0002-4668-1513
Shokan KaniyevJSC "National Scientific center of Surgery named after A.N.Syzganov", Zheltoksan str. 62, Almaty, 050004, Kazakhstan.ORCID http://orcid.org/0000-0003-3390-8931
National Scientific Center for Surgery named after A.N. Syzganov · KZLaboratory of Molecular Genetics · PLAstana Medical University · KZKaraganda Medical University · KZKazakh National Medical University · KZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe geographical distribution of hepatitis B virus (HBV) and hepatitis D virus (HDV) genotypes is uneven and has its own clinical and organizational implications for health systems. Despite the introduction of vaccination and successful antiviral therapy the prevalence of chronic hepatitis B (with or without delta agent) increased over the past 5 years. This study aimed for the first time to investigate the molecular epidemiology of HBV and HDV in Kazakhstan.

methodsTotal 834 chronic hepatitis B (with or without delta agent) patients were included to the study from November 2017 to June 2019. The material was collected from the regional hepatological сenters from 13 cities of Kazakhstan. Genotyping of HBV/HDV isolates was carried out using phylogenetic analysis of null-binary sequences of Kazakhstani isolates, in comparison with the reference sequences. Nucleotide sequence alignment was performed using the ClustalW algorithm, the "neighbor-joining" method was used for the construction of phylogenetic trees and subsequent analysis.

resultsOverall 341 samples were PCR-positive and genotyped for HBV. Comparison and phylogenetic analysis of nucleotide sequences of HBV isolates showed that they were represented by genotypes HBV-D (95.9%), HBV-A (3.5%) and HBV-C (0.6%). At the same time, the identity of the nucleotide sequences of Kazakhstani isolates were: HBV-D (95-100%); HBV-A (97.2-100%) and HBV-C (99%). 256 samples were PCR positive and genotyped for HDV, all of them belonged to genotype 1.

conclusionThis study describes for the first time the molecular epidemiology of HBV and HDV in Kazakhstan. The data obtained expand the knowledge of the global epidemiology of viruses; have potential implications for public health policy and for further clinical research on chronic hepatitis in Kazakhstan.

trial registrationClinicalTrials.gov NCT05095181 (registered on 27/10/2021).

Indexed as

Hepatitis BHepatitis B, ChronicHepatitis DGenotypeHepacivirusHepatitis B virusHepatitis Delta VirusHumansKazakhstanPhylogenyPrevalencedelta agentGenotypeHepatitis B virusHepatitis D virusPCR sequencingPhylogenetic analysis

Identifiers

PMID37580657
PMCPMC10426108
OpenAlexW4385810870

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.