Evidence map›Paper›PMID 37578737›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]2023

Genetic characterization of Sus scrofa papillomavirus type 1 from domestic pigs in Guangxi Province, China.

Yuying Li, Xinyu Zhang, Chenchen Zhao, Xiaoxiao Lei, Haixin Huang, Yaokai Shi, Chengkai Li, Jingshan Bi, Wenchao Sun, Tian Lan and 1 more

Open access · greenAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology], 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Yuying Li *Institute of Virology, Wenzhou University, Wenzhou, 325035, China.
Xinyu Zhang *Institute of Virology, Wenzhou University, Wenzhou, 325035, China.
Chenchen Zhao *Institute of Virology, Wenzhou University, Wenzhou, 325035, China.
Xiaoxiao Lei *Institute of Virology, Wenzhou University, Wenzhou, 325035, China.
Haixin HuangInstitute of Virology, Wenzhou University, Wenzhou, 325035, China.
Yaokai ShiThe Second Affiliated Hospital and Yuying Children's Hospital of Wenzhou Medical University, Wenzhou, 325027, China.
Chengkai LiThe Second Affiliated Hospital and Yuying Children's Hospital of Wenzhou Medical University, Wenzhou, 325027, China.
Jingshan BiGuangxi Centre for Animal Disease Control and Prevention, Nanning, 530001, China.
Wenchao SunInstitute of Virology, Wenzhou University, Wenzhou, 325035, China. sunwenchao131@163.com.
Tian LanInstitute of Virology, Wenzhou University, Wenzhou, 325035, China. 827002151@qq.com.
Min ZhengGuangxi Centre for Animal Disease Control and Prevention, Nanning, 530001, China. zhgmn26@163.com.
Wenzhou University · CNGuangxi Center for Disease Prevention and Control · CNSecond Affiliated Hospital & Yuying Children's Hospital of Wenzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sus scrofa papillomatosis (SsP) is a tumour caused by Sus scrofa papillomaviruses (SsPVs). To investigate the presence of SsPVs in China, 354 domestic pig skin samples collected from Guangxi Province were examined for SsPV DNA by PCR. Three SsPV1s (GX12, GX14, and GX18) were identified with a prevalence of 0.847% (3/354). Sequence analysis showed that L1 of SsPV1/GX12 and SsPV1/GX14 had 99.7% and 99.6% nucleotide identify with the reference SsPV1a, respectively. Phylogenetic and evolutionary analyses showed that SsPV1/GX12 and SsPV1/14 clustered into SsPV1a and that SsPV1/GX18 clustered into SsPV1b. Compared with other SsPV L1 and L2 proteins, we found that the SsPV1/GX18 and SsPV1b strains shared the same unique substitutions, and SsPV1/GX12, SsPV1/GX14, and SsPV1a shared almost identical amino acid sequences. This study reports the first detection of SsPV DNA in China based on whole genome information and provides a scientific basis for the development of SsPV pathogenic biology, epidemiology, and prevention, as well as control technology research.

Indexed as

PapillomaviridaeSus scrofaAnimalsChinaPhylogenyPolymerase Chain ReactionSequence Analysis, DNASwineGenomic characterizationPhylogenetic analysisSus scrofa papillomaviruses (SsPV)

Identifiers

PMID37578737
PMCPMC10484830
OpenAlexW4385798887

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.