Evidence map›Paper›PMID 37577580›Full record

ArticlebioRxiv : the preprint server for biology2023

TWISP: A Transgenic Worm for Interrogating Signal Propagation in

Anuj Kumar Sharma, Francesco Randi, Sandeep Kumar, Sophie Dvali, Andrew M Leifer

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Anuj Kumar SharmaDepartment of Physics, Princeton University, Princeton, NJ, 08544.
Francesco RandiDepartment of Physics, Princeton University, Princeton, NJ, 08544.
Sandeep KumarPrinceton Neuroscience Institute, Princeton University, Princeton, NJ, 08544.
Sophie DvaliDepartment of Physics, Princeton University, Princeton, NJ, 08544.
Andrew M LeiferDepartment of Physics, Princeton University, Princeton, NJ, 08544.
Princeton University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Probing Brain-wide Functional Connectivity During BehaviorDP2NS116768 · NINDS · PRINCETON UNIVERSITY · PI LEIFER, ANDREW MICHAEL · 2019 to 2019
$2.4M
NIH HHS P40 OD010440NINDS NIH HHS DP2 NS116768
6 · The paper itself

Abstract

Genetically encoded optical indicators and actuators of neural activity allow for all-optical investigations of signaling in the nervous system. But commonly used indicators, actuators and expression strategies are poorly suited for systematic measurements of signal propagation at brain scale and cellular resolution. Large scale measurements of the brain require indicators and actuators with compatible excitation spectra to avoid optical crosstalk. They must be highly expressed in every neuron but at the same time avoid lethality and permit the animal to reach adulthood. And finally, their expression must be compatible with additional fluorescent labels to locate and identify neurons, such as those in the NeuroPAL cell identification system. We present TWISP, a Transgenic Worm for Interrogating Signal Propagation, that address these needs and enables optical measurements of evoked calcium activity at brain scale and cellular resolution in the nervous system of the nematode

Indexed as

calcium imagingC. elegansDexamethasonedrug-inducible gene expressionfunctional connectivityGUR-3neuronsoptogeneticsPRDX-2

Identifiers

PMID37577580
PMCPMC10418184
OpenAlexW4385606288

What OpenQuestion holds

Textmetadata
LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.