Evidence map›Paper›PMID 37575592›Full record

ArticleEcology and evolution2023

DNA isolation and genome sequence of the 134-year-old holotype specimen of

Maria Shumskaya, Kirill S Mironov, Jesús A Ballesteros, Igor Safonov, Roy E Halling

Open access · goldAbstract read
In one paragraph

Article in Ecology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Maria ShumskayaDepartment of Biology, CSMT Kean University Union New Jersey USA.ORCID https://orcid.org/0000-0001-7916-462X
Kirill S MironovDepartment of Molecular Biosystems K.A. Timiryazev Institute of Plant Physiology Moscow Russian Federation.
Jesús A BallesterosDepartment of Biology, CSMT Kean University Union New Jersey USA.
Igor SafonovThe New Jersey Mycological Association Maple Shade New Jersey USA.
Roy E HallingThe New York Botanical Garden Institute of Systematic Botany Bronx New York USA.
Kean University · USAmerican Mosquito Control Association · USNew York Botanical Garden · USTimiryazev Institute of Plant Physiology · RU

Funding

Society for Epidemiologic Research Doctoral Dissertation WorkshopR13TR002021 · NCATS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI HARLOW, BERNARD L · 2017 to 2018
$46k
NCATS NIH HHS R13 TR002021
6 · The paper itself

Abstract

Molecular characterization of type specimens is a powerful tool used in clarifying species identity/circumscription, as well as establishing the taxonomic and phylogenetic status of organisms in question. However, DNA sequencing of aged herbarium collections can be a challenge due to the quantity and quality of DNA still present in the specimens. Herein, we report a custom DNA isolation protocol suitable for processing minute quantities of old specimen tissue and its utilization via high-throughput sequencing technologies to obtain, for the first time, the genome assembly of the 134-year-old holotype of

Indexed as

Boletaceaefungiherbarium specimenshistoric DNAholotype genomemuseomics

Identifiers

PMID37575592
PMCPMC10415633
OpenAlexW4385765539

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.