Evidence map›Paper›PMID 37573460›Full record

ArticleNPJ biofilms and microbiomes2023

Social demographics determinants for resistome and microbiome variation of a multiethnic community in Southern Malaysia.

J Dwiyanto, M A L Huët, M H Hussain, T T Su, J B L Tan, K Y Toh, J W J Lee, S Rahman, C W Chong

Open access · goldAbstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

J DwiyantoAMILI, Singapore, 118261, Singapore. jacky.dwiyanto@um.edu.my.ORCID http://orcid.org/0000-0002-1224-5553
M A L HuëtFaculty of Science, University of Mauritius, Reduit, 80837, Mauritius.
M H HussainSchool of Science, Monash University Malaysia, Bandar Sunway, 47500, Malaysia.
T T SuSouth East Asia Community Observatory, Segamat, 85000, Malaysia.
J B L TanSchool of Science, Monash University Malaysia, Bandar Sunway, 47500, Malaysia.ORCID http://orcid.org/0000-0001-6623-2427
K Y TohAMILI, Singapore, 118261, Singapore.ORCID http://orcid.org/0000-0001-9763-1762
J W J LeeAMILI, Singapore, 118261, Singapore.
S RahmanSchool of Science, Monash University Malaysia, Bandar Sunway, 47500, Malaysia.
C W ChongAMILI, Singapore, 118261, Singapore. chong.chunwie@monash.edu.ORCID http://orcid.org/0000-0002-6881-8883
Monash University Malaysia · MYNational University Hospital · SGUniversity Malaya Medical Centre · MYUniversity of Mauritius · MU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The prevalence of antibiotic-resistant bacteria in Southeast Asia is a significant concern, yet there is limited research on the gut resistome and its correlation with lifestyle and environmental factors in the region. This study aimed to profile the gut resistome of 200 individuals in Malaysia using shotgun metagenomic sequencing and investigate its association with questionnaire data comprising demographic and lifestyle variables. A total of 1038 antibiotic resistance genes from 26 classes were detected with a mean carriage rate of 1.74 ± 1.18 gene copies per cell per person. Correlation analysis identified 14 environmental factors, including hygiene habits, health parameters, and intestinal colonization, that were significantly associated with the resistome (adjusted multivariate PERMANOVA, p < 0.05). Notably, individuals with positive yeast cultures exhibited a reduced copy number of 15 antibiotic resistance genes. Network analysis highlighted Escherichia coli as a major resistome network hub, with a positive correlation to 36 antibiotic-resistance genes. Our findings suggest that E. coli may play a pivotal role in shaping the resistome dynamics in Segamat, Malaysia, and its abundance is strongly associated with the community's health and lifestyle habits. Furthermore, the presence of yeast appears to be associated with the suppression of antibiotic-resistance genes.

Indexed as

Gastrointestinal MicrobiomeMicrobiotaAnti-Bacterial AgentsDemographyEscherichia coliFecesHumansMalaysiaSaccharomyces cerevisiaeAnti-Bacterial Agents

Identifiers

PMID37573460
PMCPMC10423249
OpenAlexW4385780239

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.