Evidence map›Paper›PMID 37572351›Full record

ArticleFEBS open bio2023

Short-term exposure to ethanol induces transcriptional changes in nontumorigenic breast cells.

Georgiana M Miller, Tyler S Brant, James A Goodrich, Jennifer F Kugel

Open access · goldAbstract read
In one paragraph

Article in FEBS open bio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Georgiana M MillerDepartment of Biochemistry, University of Colorado Boulder, CO, USA.
Tyler S BrantDepartment of Biochemistry, University of Colorado Boulder, CO, USA.ORCID 0000-0001-9609-8273
James A GoodrichDepartment of Biochemistry, University of Colorado Boulder, CO, USA.
Jennifer F KugelDepartment of Biochemistry, University of Colorado Boulder, CO, USA.ORCID 0000-0003-1086-290X
University of Colorado Boulder · US

Funding

Defining the Genome-wide Alcohol-induced Transcriptional Changes in Breast CancerR03AA026386 · NIAAA · UNIVERSITY OF COLORADO · PI KUGEL, JENNIFER F. · 2018 to 2019
$154k
NIAAA NIH HHS R03 AA026386
6 · The paper itself

Abstract

Breast cancer is a leading cause of cancer-related deaths in women. Many genetic and behavioral risk factors can contribute to the initiation and progression of breast cancer, one being alcohol consumption. Numerous epidemiological studies have established a positive correlation between alcohol consumption and breast cancer; however, the molecular basis for this link remains ill defined. Elucidating ethanol-induced changes to global transcriptional programming in breast cells is important to ultimately understand how alcohol and breast cancer are connected mechanistically. We investigated induced transcriptional changes in response to a short cellular exposure to moderate levels of alcohol. We treated the nontumorigenic breast cell line MCF10A and the tumorigenic breast cell lines MDA-MB-231 and MCF7, with ethanol for 6 h, and then captured the changes to ongoing transcription using 4-thiouridine metabolic labeling followed by deep sequencing. Only the MCF10A cell line exhibited statistically significant changes in newly transcribed RNA in response to ethanol treatment. Further experiments revealed that some ethanol-upregulated genes are sensitive to the dose of alcohol treatment, while others are not. Gene Ontology and biochemical pathway analyses revealed that ethanol-upregulated genes in MCF10A cells are enriched in biological functions that could contribute to cancer development.

Indexed as

Breast NeoplasmsEthanolBreastCell LineFemaleHumansEthanol4sU-seqalcoholbreast cancertranscription

Identifiers

PMID37572351
PMCPMC10549231
OpenAlexW4385775418

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.