Evidence map›Paper›PMID 37569808›Full record

ArticleInternational journal of molecular sciences2023

Cancer-Associated Fibroblasts Influence Survival in Pleural Mesothelioma: Digital Gene Expression Analysis and Supervised Machine Learning Model.

Sabrina Borchert, Alexander Mathilakathu, Alina Nath, Michael Wessolly, Elena Mairinger, Daniel Kreidt, Julia Steinborn, Robert F H Walter, Daniel C Christoph, Jens Kollmeier and 4 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Sabrina BorchertInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.ORCID 0000-0002-0447-3206
Alexander MathilakathuInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.
Alina NathInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.
Michael WessollyInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.ORCID 0000-0002-4399-8646
Elena MairingerInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.
Daniel KreidtInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.
Julia SteinbornCenter for Pathology in Essen-Mitte, 45131 Essen, Germany.
Robert F H WalterInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.
Daniel C ChristophDepartment of Medical Oncology, Evangelische Kliniken Essen-Mitte, 45131 Essen, Germany.ORCID 0000-0002-3151-6427
Jens KollmeierDepartment of Pneumology, Helios Klinikum Emil von Behring, 14165 Berlin, Germany.ORCID 0000-0002-8048-3895
Jeremias WohlschlaegerDepartment of Pathology, Diakonissenkrankenhaus Flensburg, 24939 Flensburg, Germany.ORCID 0000-0002-2682-2489
Thomas MairingerDepartment of Tissue Diagnostics, Helios Klinikum Emil von Behring, 14165 Berlin, Germany.ORCID 0000-0002-0037-0066
Luka BrcicDiagnostic and Research Institute of Pathology, Medical University of Graz, 8036 Graz, Austria.ORCID 0000-0002-9098-8416
Fabian D MairingerInstitute of Pathology, University Hospital Essen, University of Duisburg Essen, 45147 Essen, Germany.ORCID 0000-0003-1067-0051
University of Duisburg-Essen · DEHelios Klinikum Emil von Behring · DEKliniken Essen-Mitte · DEDiakonissenkrankenhaus · DEMedical University of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The exact mechanism of desmoplastic stromal reaction (DSR) formation is still unclear. The interaction between cancer cells and cancer-associated fibroblasts (CAFs) has an important role in tumor progression, while stromal changes are a poor prognostic factor in pleural mesothelioma (PM). We aimed to assess the impact of CAFs paracrine signaling within the tumor microenvironment and the DSR presence on survival, in a cohort of 77 PM patients. DSR formation was evaluated morphologically and by immunohistochemistry for Fibroblast activation protein alpha (FAP). Digital gene expression was analyzed using a custom-designed CodeSet (NanoString). Decision-tree-based analysis using the "conditional inference tree" (CIT) machine learning algorithm was performed on the obtained results. A significant association between FAP gene expression levels and the appearance of DSR was found (

Indexed as

Cancer-Associated FibroblastsGene Expression Regulation, NeoplasticMachine LearningMesotheliomaPleural NeoplasmsAgedBiomarkers, TumorEndopeptidasesFemaleGene Expression ProfilingHumansMaleMesothelioma, MalignantMiddle AgedPrognosisSerine EndopeptidasesBiomarkers, TumorEndopeptidasesSerine Endopeptidasescancer-associated fibroblastsdigital gene expressionmachine learningpleural mesotheliomasurvival

Identifiers

PMID37569808
PMCPMC10419996
OpenAlexW4385577982

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.