Evidence map›Paper›PMID 37569759›Full record

ArticleInternational journal of molecular sciences2023

Label-Free Human Disease Characterization through Circulating Cell-Free DNA Analysis Using Raman Spectroscopy.

Vassilis M Papadakis, Christina Cheimonidi, Maria Panagopoulou, Makrina Karaglani, Paraskevi Apalaki, Klytaimnistra Katsara, George Kenanakis, Theodosis Theodosiou, Theodoros C Constantinidis, Kalliopi Stratigi and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Special Issue "Raman Spectroscopy and Machine Learning in Human Disease".International journal of molecular sciences · 2025
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Vassilis M PapadakisInstitute of Molecular Biology and Biotechnology, Foundation for Research and Technology, 70013 Heraklion, Greece.ORCID 0000-0003-3188-4577
Christina CheimonidiInstitute of Molecular Biology and Biotechnology, Foundation for Research and Technology, 70013 Heraklion, Greece.ORCID 0000-0003-0761-0648
Maria PanagopoulouInstitute of Agri-Food and Life Sciences, University Research & Innovation Center, Hellenic Mediterranean University, 71410 Heraklion, Greece.ORCID 0000-0002-7107-4774
Makrina KaraglaniInstitute of Agri-Food and Life Sciences, University Research & Innovation Center, Hellenic Mediterranean University, 71410 Heraklion, Greece.
Paraskevi ApalakiInstitute of Molecular Biology and Biotechnology, Foundation for Research and Technology, 70013 Heraklion, Greece.
Klytaimnistra KatsaraInstitute of Electronic Structure and Laser, Foundation for Research and Technology-Hellas, N. Plastira 100, Vasilika Vouton, 70013 Heraklion, Greece.ORCID 0000-0002-8881-1283
George KenanakisInstitute of Electronic Structure and Laser, Foundation for Research and Technology-Hellas, N. Plastira 100, Vasilika Vouton, 70013 Heraklion, Greece.ORCID 0000-0001-5843-3712
Theodosis TheodosiouLaboratory of Pharmacology, Medical School, Democritus University of Thrace, 68100 Alexandroupolis, Greece.
Theodoros C ConstantinidisLaboratory of Hygiene and Environmental Protection, Medical School, Democritus University of Thrace, 68100 Alexandroupolis, Greece.ORCID 0000-0003-3100-0823
Kalliopi StratigiInstitute of Molecular Biology and Biotechnology, Foundation for Research and Technology, 70013 Heraklion, Greece.
Ekaterini ChatzakiInstitute of Agri-Food and Life Sciences, University Research & Innovation Center, Hellenic Mediterranean University, 71410 Heraklion, Greece.ORCID 0000-0002-5832-4257
Democritus University of Thrace · GRFoundation for Research and Technology Hellas · GRHellenic Mediterranean University · GR

Funding

RESEARCH-CREATE-INNOVATE T2EΔK-00940
6 · The paper itself

Abstract

Circulating cell-free DNA (ccfDNA) is a liquid biopsy biomaterial attracting significant attention for the implementation of precision medicine diagnostics. Deeper knowledge related to its structure and biology would enable the development of such applications. In this study, we employed Raman spectroscopy to unravel the biomolecular profile of human ccfDNA in health and disease. We established reference Raman spectra of ccfDNA samples from healthy males and females with different conditions, including cancer and diabetes, extracting information about their chemical composition. Comparative observations showed a distinct spectral pattern in ccfDNA from breast cancer patients taking neoadjuvant therapy. Raman analysis of ccfDNA from healthy, prediabetic, and diabetic males uncovered some differences in their biomolecular fingerprints. We also studied ccfDNA released from human benign and cancer cell lines and compared it to their respective gDNA, confirming it mirrors its cellular origin. Overall, we explored for the first time Raman spectroscopy in the study of ccfDNA and provided spectra of samples from different sources. Our findings introduce Raman spectroscopy as a new approach to implementing liquid biopsy diagnostics worthy of further elaboration.

Indexed as

Breast NeoplasmsCell-Free Nucleic AcidsFemaleHumansLiquid BiopsyMaleSpectrum Analysis, RamanCell-Free Nucleic Acidsbiomolecularcancercell-free DNAdiabeteshumanliquid biopsyRaman spectroscopy

Identifiers

PMID37569759
PMCPMC10418917
OpenAlexW4385554712

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.