Evidence map›Paper›PMID 37569411›Full record

ArticleInternational journal of molecular sciences2023

Effects of Human Leukocyte Antigen DRB1 Genetic Polymorphism on Anti-Cyclic Citrullinated Peptide (ANTI-CCP) and Rheumatoid Factor (RF) Expression in Rheumatoid Arthritis (RA) Patients.

Yu-Chia Chen, Chung-Ming Huang, Ting-Yuan Liu, Ning Wu, Chia-Jung Chan, Peng-Yu Shih, Hsin-Han Chen, Shih-Yin Chen, Fuu-Jen Tsai

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Genes · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Yu-Chia ChenMillion-Person Precision Medicine Initiative, Department of Medical Research, China Medical University Hospital, Taichung 404, Taiwan.
Chung-Ming HuangDivision of Immunology and Rheumatology, Department of Internal Medicine, China Medical University Hospital, Taichung 404, Taiwan.
Ting-Yuan LiuMillion-Person Precision Medicine Initiative, Department of Medical Research, China Medical University Hospital, Taichung 404, Taiwan.ORCID 0000-0002-2729-0541
Ning WuDepartment of Biological Sciences, Southeastern Oklahoma State University, Durant, OK 74701, USA.
Chia-Jung ChanGenetics Center, Department of Medical Research, China Medical University Hospital, Taichung 404, Taiwan.
Peng-Yu ShihGenetics Center, Department of Medical Research, China Medical University Hospital, Taichung 404, Taiwan.
Hsin-Han ChenDivision of Plastic and Reconstructive Surgery, China Medical University Hospital, Taichung 404, Taiwan.
Shih-Yin ChenSchool of Chinese Medicine, China Medical University, Taichung 404, Taiwan.ORCID 0000-0002-6925-7627
Fuu-Jen TsaiSchool of Chinese Medicine, China Medical University, Taichung 404, Taiwan.ORCID 0000-0002-1373-245X
China Medical University · TWSoutheastern Oklahoma State University · US

Funding

China Medical University Hospital DMR-110-023 and DMR-112-126
6 · The paper itself

Abstract

Rheumatoid arthritis (RA) is a systemic disease characterized by non-infectious inflammation of the joints and surrounding tissues, which can cause severe health problems, affect the patient's daily life, and even cause death. RA can be clinically diagnosed by the occurrence of blood serological markers, rheumatoid factor (RF) and anti-cyclic citrullinated peptide antibody (anti-CCP). However, about 20% of RA patients exhibit negative results for both markers, which makes RA diagnosis difficult and, therefore, may delay the effective treatment. Previous studies found some evidence that human leukocyte antigen (HLA)-related genes might be the susceptibility genes for RA and their polymorphisms might contribute to varieties of susceptibility and disease severity. This study aimed for the genetic polymorphisms of the RA patient genome and their effects on the RA patient's serological makers, RF and anti-CCP. A total of 4580 patients' electronic medical records from 1992 to 2020 were retrieved from the China Medical University Hospital database. The most representative single-nucleotide polymorphisms (SNPs) were identified through a genome-wide association study (GWAS) followed by enzyme-linked immunosorbent assay (ELISA) validation using the blood from 30 additional RA patients. The results showed significant changes at the position of chromosome 6 with rs9270481 being the most significant locus, which indicated the location of the HLA-DRB1 gene. Further, patients with the CC genotype at this locus were more likely to exhibit negative results for RF and anti-CCP than those with the TT genotype. The C allele was also more likely to be associated with negative results for RF and anti-CCP. The results demonstrated that a genetic polymorphism at rs9270481 affected the expression of RF and anti-CCP in RA patients, which might indicate the necessity to develop a personalized treatment plan for each individual patient based on the genetic profile.

Indexed as

Anti-Citrullinated Protein AntibodiesArthritis, RheumatoidHLA-DRB1 ChainsPeptides, CyclicPolymorphism, Single NucleotideRheumatoid FactorAdultAgedAllelesBiomarkersFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansMaleAnti-Citrullinated Protein AntibodiesBiomarkerscyclic citrullinated peptideHLA-DRB1 ChainsPeptides, CyclicRheumatoid Factoranti-cyclic citrullinated peptide antibodygenome-wide association study (GWAS)human leukocyte antigen DRB1phenome-wide association studies (PheWASs)rheumatoid arthritisrheumatoid factor

Identifiers

PMID37569411
PMCPMC10418683
OpenAlexW4385348273

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.