Evidence map›Paper›PMID 37568018›Full record

ArticleNature biotechnology2023

Grand challenges in bioinformatics education and training.

Esra Büşra Işık, Michelle D Brazas, Russell Schwartz, Bruno Gaeta, Patricia M Palagi, Celia W G van Gelder, Prashanth Suravajhala, Harpreet Singh, Sarah L Morgan, Hilyatuz Zahroh and 11 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  5. Review
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  12. Review
  13. Article
  14. Experiences in providing a community educational resource for the All of Us Researcher Workbench.Journal of the American Medical Informatics Association : JAMIA · 2024
    Article
  15. Article
  16. An AI Agent for Fully Automated Multi-Omic Analyses.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Esra Büşra Işık *Beykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey.
Michelle D Brazas *Ontario Institute for Cancer Research, Toronto, Ontario, Canada.ORCID 0000-0001-8150-4531
Russell Schwartz *Carnegie Mellon University, Pittsburgh, PA, USA.
Bruno GaetaSchool of Computer Science and Engineering, University of New South Wales, Sydney, New South Wales, Australia.ORCID 0000-0003-4723-4982
Patricia M PalagiSwiss Institute of Bioinformatics, Lausanne, Switzerland.ORCID 0000-0001-9062-6303
Celia W G van GelderDutch Techcentre for Life Sciences, Utrecht, the Netherlands.
Prashanth SuravajhalaAmrita School of Biotechnology, Amrita Vishwa Vidyapeetham, Clappana, India.
Harpreet SinghAPBioNET.org, Singapore, Singapore.
Sarah L MorganEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Hinxton, UK.ORCID 0000-0001-9528-8323
Hilyatuz ZahrohAPBioNET.org, Singapore, Singapore.ORCID 0000-0002-7781-768X
Maurice LingAPBioNET.org, Singapore, Singapore.ORCID 0000-0001-7868-1238
Venkata P SatagopamLuxembourg Centre for Systems Biomedicine, University of Luxembourg, Belvaux, Luxembourg.ORCID 0000-0002-6532-5880
Annette McGrathCSIRO Data61, Brisbane, Queensland, Australia.
Kenta NakaiInstitute of Medical Science, University of Tokyo, Tokyo, Japan.ORCID 0000-0002-8721-8883
Tin Wee TanDepartment of Biochemistry, YLL School of Medicine, National University of Singapore, Singapore, Singapore.
Ge GaoState Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Biomedical Pioneering Innovative Center and Beijing Advanced Innovation Center for Genomics, Center for Bioinformatics, Peking University, Beijing, China.ORCID 0000-0001-6470-8815
Nicola MulderComputational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.ORCID 0000-0003-4905-0941
Christian Schönbach *Department of Biology, School of Sciences and Humanities, Nazarbayev University, Astana, Kazakhstan.
Yun ZhengSchool of Landscape and Horticulture, Yunnan Agricultural University, Kunming, China.
Javier De Las RivasCancer Research Center, Spanish National Research Council, University of Salamanca & Institute for Biomedical Research of Salamanca, Salamanca, Spain.ORCID 0000-0002-0984-9946
Asif M KhanBeykoz Institute of Life Sciences and Biotechnology, Bezmialem Vakif University, Istanbul, Turkey. asif.khan@udst.edu.qa.ORCID 0000-0001-9202-279X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Computational Biology

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.