Evidence map›Paper›PMID 37568013›Full record

ArticleWorld journal of microbiology & biotechnology2023

Novel expression system based on enhanced permeability of Vibrio natriegens cells induced by D,D- carboxypeptidase overexpression.

Ľubica Kormanová, Zdenko Levarski, Andrej Minich, Viktor Varga, Lenka Levarská, Eva Struhárňanská, Ján Turňa, Stanislav Stuchlík

Open access · hybridAbstract read
In one paragraph

Article in World journal of microbiology & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Vibrio natriegens: Application of a Fast-Growing Halophilic Bacterium.Advances in biochemical engineering/biotechnology · 2025
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Ľubica KormanováFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic. kormanova10@uniba.sk.
Zdenko LevarskiFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Andrej MinichFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Viktor VargaFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Lenka LevarskáScience Park, Comenius University in Bratislava, Ilkovičova 8, Bratislava, 811 04, Slovak Republic.
Eva StruhárňanskáFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Ján TurňaFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Stanislav StuchlíkFaculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, Bratislava, 811 04, Slovak Republic.
Comenius University Bratislava · SKVitenparken · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio natriegens is a fast-growing, non-pathogenic marine bacterium with promising features for biotechnological applications such as high-level recombinant protein production or fast DNA propagation. A remarkable short generation time (< 10 min), robust proteosynthetic activity and versatile metabolism with abilities to utilise wide range of substrates contribute to its establishment as a future industrial platform for fermentation processes operating with high productivity.D,D-carboxypeptidases are membrane-associated enzymes involved in peptidoglycan biosynthesis and cell wall formation. This study investigates the impact of overexpressed D,D-carboxypeptidases on membrane integrity and the increased leakage of intracellular proteins into the growth medium in V. natriegens. Our findings confirm that co-expression of these enzymes can enhance membrane permeability, thereby facilitating the transport of target proteins into the extracellular environment, without the need for secretion signals, tags, or additional permeabilization methods. Using only a single step IMAC chromatography, we were able to purify AfKatG, MDBP or Taq polymerase in total yields of 117.9 ± 56.0 mg/L, 36.5 ± 12.9 mg/L and 26.5 ± 6.0 mg/L directly from growth medium, respectively. These results demonstrate the feasibility of our V. natriegens based system as a broadly applicable extracellular tag-less recombinant protein producer.

Indexed as

Serine-Type D-Ala-D-Ala CarboxypeptidaseVibrioCarboxypeptidasesPermeabilityRecombinant ProteinsCarboxypeptidasesRecombinant ProteinsSerine-Type D-Ala-D-Ala CarboxypeptidaseD,D-carboxypeptidasesExtracellular productionRecombinant proteinsVibrio natriegens

Identifiers

PMID37568013
PMCPMC10421817
OpenAlexW4385752695

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.