ArticleNature communications2023
Subtelomeric 5-enolpyruvylshikimate-3-phosphate synthase copy number variation confers glyphosate resistance in Eleusine indica.
Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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17 citing papers in PubMed, 32 citations in OpenAlex.
- Herbicide Resistance Genes in Crops: Mechanisms, Progress, and Future Perspectives.Plants (Basel, Switzerland) · 2026Review
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- Structural Variation and Its Roles in Plant Genomes.Plants (Basel, Switzerland) · 2026Review
- Fendioxypyracil, a new and systemic PPO-inhibiting herbicide for X-spectrum weed control.Pest management science · 2026Article
- Climate change-driven expansion of goosegrass highlights risks to global food production.Pest management science · 2026Article
- Establishment of a versatile virus-based system for elucidating herbicide resistance in Galium aparine.Plant physiology · 2026Article
- Mitochondrial heterogeneity drives the evolution of fungicide resistance inScience advances · 2026Article
- Transcriptomic Insights into the Dual-Modulatory Role of EGCG in Alleviating Glyphosate-Induced Oxidative Stress inInternational journal of molecular sciences · 2025Article
- Toward improving multiomic research in understudied cereals.Nature genetics · 2025Review
- Unraveling the Role of P450 Reductase in Herbicide Metabolic Resistance Mechanism.Plant direct · 2025Article
- Over-expression and increased copy numbers of a cytochrome P450 and two UDP-glucuronosyltransferase genes in macrocyclic lactone resistant Psoroptes ovis of cattle.PLoS pathogens · 2025Article
- A rearranged Amaranthus palmeri extrachromosomal circular DNA confers resistance to glyphosate and glufosinate.The Plant cell · 2025Article
- Chromosome-scale genome assembly of Korean goosegrass (Eleusine indica).Scientific data · 2025Article
- Affecting of Glyphosate Tolerance and Metabolite Content in TransgenicPlants (Basel, Switzerland) · 2024Article
- Current status of community resources and priorities for weed genomics research.Genome biology · 2024Review
- Weed biology and management in the multi-omics era: Progress and perspectives.Plant communications · 2024Review
- Subtelomeric 5-enolpyruvylshikimate-3-phosphate synthase copy number variation confers glyphosate resistance in Eleusine indica.Nature communications · 2023Article
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6 authors at 3 institutions in 3 countries.
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Abstract
Genomic structural variation (SV) has profound effects on organismal evolution; often serving as a source of novel genetic variation. Gene copy number variation (CNV), one type of SV, has repeatedly been associated with adaptive evolution in eukaryotes, especially with environmental stress. Resistance to the widely used herbicide, glyphosate, has evolved through target-site CNV in many weedy plant species, including the economically important grass, Eleusine indica (goosegrass); however, the origin and mechanism of these CNVs remain elusive in many weed species due to limited genetic and genomic resources. To study this CNV in goosegrass, we present high-quality reference genomes for glyphosate-susceptible and -resistant goosegrass lines and fine-assembles of the duplication of glyphosate's target site gene 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS). We reveal a unique rearrangement of EPSPS involving chromosome subtelomeres. This discovery adds to the limited knowledge of the importance of subtelomeres as genetic variation generators and provides another unique example for herbicide resistance evolution.
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