Evidence map›Paper›PMID 37565053›Full record

ArticleCancer research communications2023

MHC Class II is Induced by IFNγ and Follows Three Distinct Patterns of Expression in Colorectal Cancer Organoids.

Oliver J Pickles, Kasun Wanigasooriya, Anetta Ptasinska, Akshay J Patel, Helen L Robbins, Claire Bryer, Celina M Whalley, Louise Tee, Neeraj Lal, Claudia M A Pinna and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cancer research communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Oliver J PicklesInstitute of Immunology and Immunotherapy, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-8519-7644
Kasun WanigasooriyaInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-3683-1864
Anetta PtasinskaInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-5001-3294
Akshay J PatelInstitute of Immunology and Immunotherapy, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0001-9170-8618
Helen L RobbinsInstitute of Immunology and Immunotherapy, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0001-8283-0830
Claire BryerInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-7900-3460
Celina M WhalleyInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0001-7183-5388
Louise TeeInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0009-0007-9472-506X
Neeraj LalInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-1745-977X
Claudia M A PinnaInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0002-5618-7842
Nahla ElzefzafyInstitute of Cancer and Genomic Science, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0003-1487-9872
Philippe TaniereUniversity Hospitals Birmingham NHS Foundation Trust, Birmingham, United Kingdom.ORCID 0000-0002-4638-4551
Andrew D BeggsUniversity Hospitals Birmingham NHS Foundation Trust, Birmingham, United Kingdom.ORCID 0000-0003-0784-2967
Gary M MiddletonInstitute of Immunology and Immunotherapy, College of Medical and Dental Science, University of Birmingham, Edgbaston, Birmingham, United Kingdom.ORCID 0000-0001-5695-3474
University of Birmingham · GBUniversity Hospitals Birmingham NHS Foundation Trust · GBCairo University · EG

Funding

Cancer Research UK RCCPOB-MAY23/100004
6 · The paper itself

Abstract

Tumor-specific MHC class II (tsMHC-II) expression impacts tumor microenvironmental immunity. tsMHC-II positive cancer cells may act as surrogate antigen-presenting cells and targets for CD4 Significance: Cancer cell expression of MHC class II significantly impacts tumor microenvironmental immunity. Previous studies investigating mechanisms of repression of IFNγ-inducible class II expression using cell lines demonstrate epigenetic silencing of IFN pathway genes as a frequent immune evasion strategy. Unlike cell lines, patient-derived organoids maintain epigenetic fidelity to tissue of origin. In the first such study, we analyze patterns, dynamics, and epigenetic control of IFNγ-induced class II expression in a series of colorectal cancer organoids.

Indexed as

Colorectal NeoplasmsGenes, MHC Class IICell LineHumansInterferon-gammaMethylationInterferon-gamma

Identifiers

PMID37565053
PMCPMC10411481
OpenAlexW4384338983

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.