Evidence map›Paper›PMID 37564725›Full record

ArticleFrontiers in bioinformatics2023

Digital staining facilitates biomedical microscopy.

Michael John Fanous, Nir Pillar, Aydogan Ozcan

Abstract read
In one paragraph

Article in Frontiers in bioinformatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Michael John FanousElectrical and Computer Engineering Department, University of California, Los Angeles, CA, United States.
Nir PillarElectrical and Computer Engineering Department, University of California, Los Angeles, CA, United States.
Aydogan OzcanElectrical and Computer Engineering Department, University of California, Los Angeles, CA, United States.

Funding

TRD3: Data Analytics and Intelligent Systems (AI-ML-DL-Visualization)P41EB032840 · NIBIB · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Griffith R. Harsh, Laura Marcu · 2022 to 2026
$6.7M
NIBIB NIH HHS P41 EB032840
6 · The paper itself

Abstract

Traditional staining of biological specimens for microscopic imaging entails time-consuming, laborious, and costly procedures, in addition to producing inconsistent labeling and causing irreversible sample damage. In recent years, computational "virtual" staining using deep learning techniques has evolved into a robust and comprehensive application for streamlining the staining process without typical histochemical staining-related drawbacks. Such virtual staining techniques can also be combined with neural networks designed to correct various microscopy aberrations, such as out-of-focus or motion blur artifacts, and improve upon diffracted-limited resolution. Here, we highlight how such methods lead to a host of new opportunities that can significantly improve both sample preparation and imaging in biomedical microscopy.

Indexed as

biomedical microscopycomputational imagingcomputational stainingdigital pathologydigital stainingintelligent microscopyquantitative phase imagingvirtual staining

Identifiers

PMID37564725
PMCPMC10411189

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.