Evidence map›Paper›PMID 37564635›Full record

ArticleFrontiers in immunology2023

Prognostic and immunomodulatory roles of schizophrenia-associated genes HTR2A, COMT, and PRODH in pan-cancer analysis and glioma survival prediction model.

Jing Shen, Qiang Wang, Fengquan Lu, Hua Xu, Peng Wang, Yu Feng

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jing ShenMedical laboratory, The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, Suzhou, China.
Qiang WangMedical laboratory, The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, Suzhou, China.
Fengquan LuMedical laboratory, The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, Suzhou, China.
Hua XuMedical laboratory, The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, Suzhou, China.
Peng WangSuzhou Key Laboratory of Neuro-Oncology and Nano-Bionics, Suzhou, China.
Yu FengMedical laboratory, The Affiliated Jiangsu Shengze Hospital of Nanjing Medical University, Suzhou, China.
Nanjing Medical University · CNSuzhou Institute of Nano-tech and Nano-bionics · CNUniversity of Melbourne · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The shortened life expectancy in schizophrenia (SCZ) patients may be correlated with most cancers, yet there is heterogeneity in the studies examining these correlations. This study explored the expression of SCZ-related genes (HTR2A, COMT, and PRODH) in pan-cancer analysis. It helped to enhance the mechanistic understanding of the SCZ-cancer relationship and their immune mechanisms at the genetic level. Additionally, this study established a survival prediction model for glioblastoma and low-grade glioma (GBMLGG). Methods and results: SCZ-associated genes (HTR2A, COMT, and PRODH) were subjected to pan-cancer analysis. COX regression analysis and survival analysis were carried out for differentially expressed genes in multiple cancers, and finally, GBMLGG was derived as the focus for further detailed analysis. The immune scores and immune cell infiltration analyses were performed. All three genes were considerably linked with immune infiltration in GBMLGG, consistent with survival analysis. Based on the immunocyte analysis, it was observed that CD8 Conclusion: SCZ-associated genes (HTR2A, COMT, and PRODH) were significantly differentially expressed in the carcinogenesis and survival of multiple cancers. The up or downregulation of gene expression varied across cancer types. In the GBMLGG analysis, upregulation of HTR2A and COMT was significantly positively correlated with carcinogenesis, while the opposite was noted for PRODH. Furthermore, a negative correlation was found between the upregulation of HTR2A and COMT and the survival of GBMLGG, and the opposite was also noted for PRODH. As reflected in the immunocyte analysis, abnormal expression of the three genes might be linked with CD8

Indexed as

Catechol O-MethyltransferaseGliomaProline OxidaseReceptor, Serotonin, 5-HT2ASchizophreniaCarcinogenesisCD8-Positive T-LymphocytesHumansPrognosisCatechol O-MethyltransferaseCOMT protein, humanHTR2A protein, humanPRODH protein, humanProline OxidaseReceptor, Serotonin, 5-HT2ACOMTglioblastoma and low-grade gliomaHTR2Apan-cancerProDHschizophreniasingle-cell RNA sequencing

Identifiers

PMID37564635
PMCPMC10411190
OpenAlexW4385272124

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.