Evidence map›Paper›PMID 37563801›Full record

ArticleJournal of dental research2023

Mutations Causing X-Linked Amelogenesis Imperfecta Alter miRNA Formation from Amelogenin Exon4.

R Shemirani, M H Le, Y Nakano

Open access · hybridAbstract read
In one paragraph

Article in Journal of dental research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R ShemiraniDepartment of Orofacial Sciences, School of Dentistry, University of California, San Francisco, CA, USA.
M H LeOral and Craniofacial Science, Graduate Division, University of California, San Francisco, CA, USA.
Y NakanoDepartment of Orofacial Sciences, School of Dentistry, University of California, San Francisco, CA, USA.ORCID 0000-0002-1799-1205
University of California, San Francisco · US

Funding

UCSF INTEGRATED DDS-PHD TRAINING PROGRAMT32DE007306 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Yukiko Nakano · 1996 to 2026
$15.4M
Enamel biomineralization; the role of pH cyclingR01DE027971 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Pamela K Den Besten · 2019 to 2026
$4.5M
Role of miRNA from amelogenin exon4 in enamel formationR01DE027366 · NIDCR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NAKANO, YUKIKO · 2018 to 2022
$1.9M
NIDCR NIH HHS R01 DE027366NIDCR NIH HHS R01 DE027971NIDCR NIH HHS T32 DE007306
6 · The paper itself

Abstract

Amelogenin plays a crucial role in tooth enamel formation, and mutations on X-chromosomal amelogenin cause X-linked amelogenesis imperfecta (AI). Amelogenin pre-messenger RNA (mRNA) is highly alternatively spliced, and during alternative splicing, exon4 is mostly skipped, leading to the formation of a microRNA (miR-exon4) that has been suggested to function in enamel and bone formation. While delivering the functional variation of amelogenin proteins, alternative splicing of exon4 is the decisive first step to producing miR-exon4. However, the factors that regulate the splicing of exon4 are not well understood. This study aimed to investigate the association between known mutations in exon4 and exon5 of X chromosome amelogenin that causes X-linked AI, the splicing of exon4, and miR-exon4 formation. Our results showed mutations in exon4 and exon5 of the amelogenin gene, including c.120T>C, c.152C>T, c.155C>G, and c.155delC, significantly affected the splicing of exon4 and subsequent miR-exon4 production. Using an amelogenin minigene transfected in HEK-293 cells, we observed increased inclusion of exon4 in amelogenin mRNA and reduced miR-exon4 production with these mutations. In silico analysis predicted that Ser/Arg-rich RNA splicing factor (SRSF) 2 and SRSF5 were the regulatory factors for exon4 and exon5 splicing, respectively. Electrophoretic mobility shift assay confirmed that SRSF2 binds to exon4 and SRSF5 binds to exon5, and mutations in each exon can alter SRSF binding. Transfection of the amelogenin minigene to LS8 ameloblastic cells suppressed expression of the known miR-exon4 direct targets,

Indexed as

Amelogenesis ImperfectaDental Enamel ProteinsMicroRNAsAmelogeninHEK293 CellsHumansMutationRNA, MessengerAmelogeninDental Enamel ProteinsMicroRNAsRNA, Messengeralternative splicingameloblastsamelogenesisdental enameldevelopmental defects of enamelRNA splicing factors

Identifiers

PMID37563801
PMCPMC10548775
OpenAlexW4385751228

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.