Evidence map›Paper›PMID 37563460›Full record

ArticleNature plants2023

Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat.

Jeffrey A Fawcett, Ryoma Takeshima, Shinji Kikuchi, Euki Yazaki, Tomoyuki Katsube-Tanaka, Yumei Dong, Meifang Li, Harriet V Hunt, Martin K Jones, Diane L Lister and 18 more

Abstract read
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In one paragraph

Article in Nature plants, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
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  3. CRISPR/Cas9-mediatedFrontiers in plant science · 2026
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  13. Article
  14. EfficientInternational journal of molecular sciences · 2025
    Article
  15. Article
  16. Article
  17. APETALA2-like Floral Homeotic Protein Up-RegulatingInternational journal of molecular sciences · 2024
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors.

Jeffrey A Fawcett *RIKEN iTHEMS, Wako, Japan. jeffrey.fawcett@riken.jp.ORCID 0000-0003-3907-2135
Ryoma Takeshima *Institute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.ORCID 0000-0002-2525-7334
Shinji KikuchiGraduate School of Horticulture, Chiba University, Matsudo, Japan.ORCID 0000-0002-6776-7463
Euki YazakiRIKEN iTHEMS, Wako, Japan.ORCID 0000-0003-4962-3340
Tomoyuki Katsube-TanakaGraduate School of Agriculture, Kyoto University, Kyoto, Japan.ORCID 0000-0003-3760-6412
Yumei DongState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, China.ORCID 0000-0002-8343-7149
Meifang LiState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, China.ORCID 0000-0001-5391-6563
Harriet V HuntMcDonald Institute for Archaeological Research, University of Cambridge, Cambridge, UK.
Martin K JonesMcDonald Institute for Archaeological Research, University of Cambridge, Cambridge, UK.ORCID 0000-0003-0930-8012
Diane L ListerMcDonald Institute for Archaeological Research, University of Cambridge, Cambridge, UK.ORCID 0000-0002-1227-707X
Takanori OhsakoGraduate School of Life and Environmental Sciences, Kyoto Prefectural University, Kyoto, Japan.
Eri Ogiso-TanakaInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.ORCID 0000-0002-7655-3408
Kenichiro FujiiInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Takashi HaraHokkaido Agricultural Research Center, National Agriculture and Food Research Organization (NARO), Kasai, Japan.
Katsuhiro MatsuiInstitute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Japan.
Nobuyuki MizunoGraduate School of Agriculture, Kyoto University, Kyoto, Japan.ORCID 0000-0003-2100-5575
Kazusa NishimuraGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Tetsuya NakazakiGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Hiroki SaitoGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Naoko TakeuchiGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Mariko UenoGraduate School of Agriculture, Kyoto University, Kyoto, Japan.
Daiki MatsumotoFaculty of Bioscience and Biotechnology, Fukui Prefectural University, Awara, Japan.
Miyu NorizukiGraduate School of Horticulture, Chiba University, Matsudo, Japan.
Kenta ShirasawaKazusa DNA Research Institute, Kisarazu, Japan.ORCID 0000-0001-7880-6221
Chengyun LiState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, China. lichengyun@ynau.edu.cn.
Hideki HirakawaKazusa DNA Research Institute, Kisarazu, Japan. hh@kazusa.or.jp.ORCID 0000-0002-7128-7390
Tatsuya OtaDepartment of Evolutionary Studies of Biosystems, SOKENDAI, Hayama, Japan. ota@soken.ac.jp.ORCID 0000-0002-1115-5169
Yasuo YasuiGraduate School of Agriculture, Kyoto University, Kyoto, Japan. yasui.yasuo.2a@kyoto-u.ac.jp.ORCID 0000-0003-3804-7886

Funding

Cabinet Office, Government of Japan JPJ009237Leverhulme Trust RPG-2017-196MEXT | Japan Science and Technology Agency (JST) JPMJAX20BAMEXT | Japan Society for the Promotion of Science (JSPS) 18KK0172MEXT | Japan Society for the Promotion of Science (JSPS) 20K06761MEXT | Japan Society for the Promotion of Science (JSPS) 21H00356MEXT | Japan Society for the Promotion of Science (JSPS) 22H05181NARO | Bio-oriented Technology Research Advancement Institution (BRAIN) JPJ007097
6 · The paper itself

Abstract

Common buckwheat, Fagopyrum esculentum, is an orphan crop domesticated in southwest China that exhibits heterostylous self-incompatibility. Here we present chromosome-scale assemblies of a self-compatible F. esculentum accession and a self-compatible wild relative, Fagopyrum homotropicum, together with the resequencing of 104 wild and cultivated F. esculentum accessions. Using these genomic data, we report the roles of transposable elements and whole-genome duplications in the evolution of Fagopyrum. In addition, we show that (1) the breakdown of heterostyly occurs through the disruption of a hemizygous gene jointly regulating the style length and female compatibility and (2) southeast Tibet was involved in common buckwheat domestication. Moreover, we obtained mutants conferring the waxy phenotype for the first time in buckwheat. These findings demonstrate the utility of our F. esculentum assembly as a reference genome and promise to accelerate buckwheat research and breeding.

Indexed as

FagopyrumBase SequenceChromosome MappingDomesticationPlant Breeding

Identifiers

PMID37563460

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.