Evidence map›Paper›PMID 37563294›Full record

ArticleNature neuroscience2023

Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis.

Alexandre Jourdon, Feinan Wu, Jessica Mariani, Davide Capauto, Scott Norton, Livia Tomasini, Anahita Amiri, Milovan Suvakov, Jeremy D Schreiner, Yeongjun Jang and 12 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 61 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed, 1 pooled it
16.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 1 synthesis or guideline pooled it, 93 citations in OpenAlex.

  1. Pooled it
  2. Using Brain Organoids to Explore Human Neurobiology.Cellular and molecular neurobiology · 2026
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 2 institutions in 1 country.

Alexandre Jourdon *Child Study Center, Yale University School of Medicine, New Haven, CT, USA.
Feinan Wu *Child Study Center, Yale University School of Medicine, New Haven, CT, USA.
Jessica Mariani *Child Study Center, Yale University School of Medicine, New Haven, CT, USA.
Davide CapautoChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Scott NortonChild Study Center, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-1366-0628
Livia TomasiniChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Anahita AmiriChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Milovan SuvakovDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Jeremy D SchreinerChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Yeongjun JangDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.ORCID http://orcid.org/0000-0002-7816-3278
Arijit PandaDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA.
Cindy Khanh NguyenChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Elise M CummingsChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Gloria HanChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Kelly PowellChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Anna SzekelyDepartment of Neurology, Yale University School of Medicine, New Haven, CT, USA.
James C McPartlandChild Study Center, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-2570-0746
Kevin PelphreyChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Katarzyna ChawarskaChild Study Center, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-1445-6346
Pamela VentolaChild Study Center, Yale University School of Medicine, New Haven, CT, USA.
Alexej AbyzovDepartment of Quantitative Health Sciences, Center for Individualized Medicine, Mayo Clinic, Rochester, MN, USA. abyzov.alexej@mayo.edu.ORCID http://orcid.org/0000-0001-5405-6729
Flora M VaccarinoChild Study Center, Yale University School of Medicine, New Haven, CT, USA. flora.vaccarino@yale.edu.ORCID http://orcid.org/0000-0003-2167-981X
Yale University · USMayo Clinic · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Statistical Analysis CoreP50MH115716 · NIMH · YALE UNIVERSITY · PI CHAWARSKA, KATARZYNA · 2017 to 2021
$11.5M
TIPS: Training in Perioperative ScienceT32GM108554 · NIGMS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI Eric J Delpire · 2014 to 2026
$3.7M
Neurobiology of Autism With MacrocephalyR01MH109648 · NIMH · YALE UNIVERSITY · PI VACCARINO, FLORA M · 2016 to 2021
$3.3M
NCATS NIH HHS UL1 TR001863NIGMS NIH HHS T32 GM108554NIMH NIH HHS P50 MH115716NIMH NIH HHS R01 MH109648
6 · The paper itself

Abstract

Idiopathic autism spectrum disorder (ASD) is highly heterogeneous, and it remains unclear how convergent biological processes in affected individuals may give rise to symptoms. Here, using cortical organoids and single-cell transcriptomics, we modeled alterations in the forebrain development between boys with idiopathic ASD and their unaffected fathers in 13 families. Transcriptomic changes suggest that ASD pathogenesis in macrocephalic and normocephalic probands involves an opposite disruption of the balance between excitatory neurons of the dorsal cortical plate and other lineages such as early-generated neurons from the putative preplate. The imbalance stemmed from divergent expression of transcription factors driving cell fate during early cortical development. While we did not find genomic variants in probands that explained the observed transcriptomic alterations, a significant overlap between altered transcripts and reported ASD risk genes affected by rare variants suggests a degree of gene convergence between rare forms of ASD and the developmental transcriptome in idiopathic ASD.

Indexed as

Autism Spectrum DisorderAutistic DisorderHumansMaleNeurogenesisNeuronsOrganoidsProsencephalon

Identifiers

PMID37563294
PMCPMC10573709
OpenAlexW4385741485

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.