Evidence map›Paper›PMID 37561801›Full record

ArticlePLoS computational biology2023

A new method for the analysis of access period experiments, illustrated with whitefly-borne cassava mosaic begomovirus.

Ruairí Donnelly, Christopher A Gilligan

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. A comprehensive review onFrontiers in genetics · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Ruairí DonnellyDepartment of Plant Sciences, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0001-7642-0317
Christopher A GilliganDepartment of Plant Sciences, University of Cambridge, Cambridge, United Kingdom.
University of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reports of low transmission efficiency, of a cassava mosaic begomovirus (CMB) in Bemisia tabaci whitefly, diminished the perceived importance of whitefly in CMB epidemics. Studies indicating synergies between B. tabaci and CMB prompt a reconsideration of this assessment. In this paper, we analysed the retention period and infectiousness of CMB-carrying B. tabaci as well as B. tabaci susceptibility to CMB. We assessed the role of low laboratory insect survival in historic reports of a 9d virus retention period. To do this, we introduced Bayesian analyses to an important class of experiment in plant pathology. We were unable to reject a null hypothesis of life-long CMB retention when we accounted for low insect survival. Our analysis confirmed low insect survival, with insects surviving on average for around three days of transfers from the original infected plant to subsequent test plants. Use of the new analysis to account for insect death may lead to re-calibration of retention periods for other important insect-borne plant pathogens. In addition, we showed that B. tabaci susceptibility to CMB is substantially higher than previously thought. We also introduced a technique for high resolution analysis of retention period, showing that B. tabaci infectiousness with CMB was increasing over the first five days of infection.

Indexed as

BegomovirusHemipteraManihotAnimalsBayes TheoremPlant Diseases

Identifiers

PMID37561801
PMCPMC10461850
OpenAlexW4385719333

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.