Evidence map›Paper›PMID 37561218›Full record

ArticleArchives of virology2023

Amesuviridae: a new family of plant-infecting viruses in the phylum Cressdnaviricota, realm Monodnaviria.

João Paulo Herrera da Silva, Franciely Maria Pereira de Resende, José Cleydson Ferreira da Silva, Soledad de Breuil, Claudia Nome, Nicolas Bejerman, Francisco Murilo Zerbini

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Archives of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Phylogeographic analysis ofThe Journal of general virology · 2024
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

João Paulo Herrera da SilvaDep. de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil.ORCID http://orcid.org/0000-0002-3108-5313
Franciely Maria Pereira de ResendeDep. de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil.
José Cleydson Ferreira da SilvaDep. de Bioquímica e Biologia Molecular/BIOAGRO, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil.ORCID http://orcid.org/0000-0001-5435-702X
Soledad de BreuilInstituto de Patología Vegetal, Centro de Investigaciones, Instituto Nacional de Tecnología Agropecuaria (IPAVE-CIAP-INTA), Camino 60 Cuadras Km 5.5, X5020ICA, Agropecuarias, Córdoba, Argentina.
Claudia NomeInstituto de Patología Vegetal, Centro de Investigaciones, Instituto Nacional de Tecnología Agropecuaria (IPAVE-CIAP-INTA), Camino 60 Cuadras Km 5.5, X5020ICA, Agropecuarias, Córdoba, Argentina.
Nicolas BejermanInstituto de Patología Vegetal, Centro de Investigaciones, Instituto Nacional de Tecnología Agropecuaria (IPAVE-CIAP-INTA), Camino 60 Cuadras Km 5.5, X5020ICA, Agropecuarias, Córdoba, Argentina.ORCID http://orcid.org/0000-0002-7851-3506
Francisco Murilo ZerbiniDep. de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil. zerbini@ufv.br.ORCID http://orcid.org/0000-0001-8617-0200
Universidade Federal de Viçosa · BRNational Agricultural Technology Institute · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The phylum Cressdnaviricota comprises viruses with single-stranded, circular DNA genomes that encode an HUH-type endonuclease (known as Rep). The phylum includes two classes, eight orders, and 11 families. Here, we report the creation of a twelfth family in the order Mulpavirales, class Arfiviricetes of the phylum Cressdnaviricota. The family Amesuviridae comprises viruses that infect plants and is divided into two genera: Temfrudevirus, including the species Temfrudevirus temperatum (with temperate fruit decay-associated virus as a member), and Yermavirus, including the species Yermavirus ilicis (with yerba mate-associated circular DNA virus as a member). Both viruses encode Rep proteins with HUH endonuclease and SH3 superfamily helicase domains. Phylogenetic analysis indicates that the replicative module of amesuviruses constitutes a well-supported monophyletic clade related to Rep proteins from viruses in the order Mulpavirales. Furthermore, both viruses encode a single capsid protein (CP) related to geminivirus CPs. Phylogenetic incongruence between the replicative and structural modules of amesuviruses suggests a chimeric origin resulting from remote recombination events between ancestral mulpavirales and geminivirids. The creation of the family Amesuviridae has been ratified by the International Committee on Taxonomy of Viruses (ICTV).

Indexed as

DNA VirusesPlant VirusesDNA, CircularDNA, Single-StrandedEndonucleasesGeminiviridaeGenome, ViralPhylogenyDNA, CircularDNA, Single-StrandedEndonucleases

Identifiers

PMID37561218
OpenAlexW4385716298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.