Evidence map›Paper›PMID 37558727›Full record

ArticleScientific reports2023

Low-dose radiation induces unstable gene expression in developing human iPSC-derived retinal ganglion organoids.

Mari Katsura, Yoshihiro Urade, Hiroko Nansai, Mika Kobayashi, Akashi Taguchi, Yukiko Ishikawa, Tomohiro Ito, Hisako Fukunaga, Hideto Tozawa, Yoko Chikaoka and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. External Disruption of Ocular DevelopmentThe Yale journal of biology and medicine · 2024
    Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

Mari KatsuraIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Yoshihiro UradeIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Hiroko NansaiGraduate School of Medicine and Faculty of Medicine, The University of Tokyo, Tokyo, Japan.
Mika KobayashiIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Akashi TaguchiIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Yukiko IshikawaIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Tomohiro ItoCenter for Health and Environmental Risk Research, National Institute for Environmental Studies, Tsukuba, Ibaraki, Japan.
Hisako FukunagaGraduate School of Medicine and Faculty of Medicine, The University of Tokyo, Tokyo, Japan.
Hideto TozawaGraduate School of Science, The University of Tokyo, Tokyo, Japan.
Yoko ChikaokaIsotope Science Center, The University of Tokyo, Tokyo, Japan.
Ryo NakakiRhelixa Co., Ltd, Tokyo, Japan.
Akinobu EchigoTomy Digital Biology Co., Ltd, Tokyo, Japan.
Takahide KohroDepartment of Clinical Informatics, Jichi Medical University, Shimotsuke, Tochigi, Japan.
Hideko SoneCenter for Health and Environmental Risk Research, National Institute for Environmental Studies, Tsukuba, Ibaraki, Japan. hideko.sone@yok.hamayaku.ac.jp.
Youichiro WadaIsotope Science Center, The University of Tokyo, Tokyo, Japan. ywada-tky@umin.ac.jp.
The University of Tokyo · JPJichi Medical University · JPMinamiaoyama Eye Clinic · JPNational Institute for Environmental Studies · JPTokyo University of Science · JPYokohama University of Pharmacy · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The effects of low-dose radiation on undifferentiated cells carry important implications. However, the effects on developing retinal cells remain unclear. Here, we analyzed the gene expression characteristics of neuronal organoids containing immature human retinal cells under low-dose radiation and predicted their changes. Developing retinal cells generated from human induced pluripotent stem cells (iPSCs) were irradiated with either 30 or 180 mGy on days 4-5 of development for 24 h. Genome-wide gene expression was observed until day 35. A knowledge-based pathway analysis algorithm revealed fluctuations in Rho signaling and many other pathways. After a month, the levels of an essential transcription factor of eye development, the proportion of paired box 6 (PAX6)-positive cells, and the proportion of retinal ganglion cell (RGC)-specific transcription factor POU class 4 homeobox 2 (POU4F2)-positive cells increased with 30 mGy of irradiation. In contrast, they decreased after 180 mGy of irradiation. Activation of the "development of neurons" pathway after 180 mGy indicated the dedifferentiation and development of other neural cells. Fluctuating effects after low-dose radiation exposure suggest that developing retinal cells employ hormesis and dedifferentiation mechanisms in response to stress.

Indexed as

Induced Pluripotent Stem CellsRetinal Ganglion CellsCell DifferentiationGene ExpressionHumansOrganoidsRetina

Identifiers

PMID37558727
PMCPMC10412642
OpenAlexW4385699956

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.