Evidence map›Paper›PMID 37558695›Full record

ArticleNature communications2023

Profiling cell envelope-antibiotic interactions reveals vulnerabilities to β-lactams in a multidrug-resistant bacterium.

Andrew M Hogan, A S M Zisanur Rahman, Anna Motnenko, Aakash Natarajan, Dustin T Maydaniuk, Beltina León, Zayra Batun, Armando Palacios, Alejandra Bosch, Silvia T Cardona

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
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  4. In vitro susceptibility ofNew microbes and new infections · 2025
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  9. Review
  10. CRISPRi-Mediated Silencing ofJournal of proteome research · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Andrew M HoganDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID http://orcid.org/0000-0002-0782-012X
A S M Zisanur Rahman *Department of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.
Anna Motnenko *Department of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID http://orcid.org/0000-0002-8317-6911
Aakash NatarajanDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID http://orcid.org/0000-0002-4877-8714
Dustin T MaydaniukDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID http://orcid.org/0000-0002-5259-7940
Beltina LeónCINDEFI, CONICET-CCT La Plata, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Buenos Aires, Argentina.ORCID http://orcid.org/0000-0001-9322-9442
Zayra BatunDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID http://orcid.org/0000-0002-1652-5499
Armando PalaciosDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada.
Alejandra BoschCINDEFI, CONICET-CCT La Plata, Facultad de Ciencias Exactas, Universidad Nacional de La Plata, La Plata, Buenos Aires, Argentina.ORCID http://orcid.org/0000-0002-8243-7577
Silvia T CardonaDepartment of Microbiology, University of Manitoba, Winnipeg, Manitoba, Canada. Silvia.Cardona@umanitoba.ca.ORCID http://orcid.org/0000-0002-0629-8886
University of Manitoba · CAConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

CIHR
6 · The paper itself

Abstract

The cell envelope of Gram-negative bacteria belonging to the Burkholderia cepacia complex (Bcc) presents unique restrictions to antibiotic penetration. As a consequence, Bcc species are notorious for causing recalcitrant multidrug-resistant infections in immunocompromised individuals. Here, we present the results of a genome-wide screen for cell envelope-associated resistance and susceptibility determinants in a Burkholderia cenocepacia clinical isolate. For this purpose, we construct a high-density, randomly-barcoded transposon mutant library and expose it to 19 cell envelope-targeting antibiotics. By quantifying relative mutant fitness with BarSeq, followed by validation with CRISPR-interference, we profile over a hundred functional associations and identify mediators of antibiotic susceptibility in the Bcc cell envelope. We reveal connections between β-lactam susceptibility, peptidoglycan synthesis, and blockages in undecaprenyl phosphate metabolism. The synergy of the β-lactam/β-lactamase inhibitor combination ceftazidime/avibactam is primarily mediated by inhibition of the PenB carbapenemase. In comparison with ceftazidime, avibactam more strongly potentiates the activity of aztreonam and meropenem in a panel of Bcc clinical isolates. Finally, we characterize in Bcc the iron and receptor-dependent activity of the siderophore-cephalosporin antibiotic, cefiderocol. Our work has implications for antibiotic target prioritization, and for using additional combinations of β-lactam/β-lactamase inhibitors that can extend the utility of current antibacterial therapies.

Indexed as

Anti-Bacterial AgentsCeftazidimeAzabicyclo Compoundsbeta-Lactamase Inhibitorsbeta-LactamasesDrug CombinationsHumansMeropenemMicrobial Sensitivity TestsAnti-Bacterial AgentsavibactamAzabicyclo Compoundsbeta-Lactamase Inhibitorsbeta-LactamasesCeftazidimeDrug CombinationsMeropenem

Identifiers

PMID37558695
PMCPMC10412643
OpenAlexW4385690595

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.