Evidence map›Paper›PMID 37556341›Full record

ArticleIEEE transactions on bio-medical engineering2024

A Non-Contrast Multi-Parametric MRI Biomarker for Assessment of MR-Guided Focused Ultrasound Thermal Therapies.

Sara Johnson, Blake Zimmerman, Henrik Odeen, Jill Shea, Nicole Winkler, Rachel Factor, Sarang Joshi, Allison Payne

Abstract read
In one paragraph

Article in IEEE transactions on bio-medical engineering, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sara Johnson
Blake Zimmerman
Henrik Odeen
Jill Shea
Nicole Winkler
Rachel Factor
Sarang Joshi
Allison Payne

Funding

UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI KATHARINE S ULLMAN · 1986 to 2026
$72.6M
Validation and translation of a non-invasive, MR-guided breast cancer therapyR37CA224141 · NCI · UNIVERSITY OF UTAH · PI PAYNE, ALLISON · 2018 to 2024
$3.7M
A tissue viability imaging biomarker for use in non-invasive breast cancer therapyR01CA259686 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI SARANG JOSHI, Allison Payne · 2022 to 2026
$2.9M
Siemens MAGNETOM Vida 3T MRI ScannerS10OD026788 · OD · UNIVERSITY OF UTAH · PI PARKER, DENNIS L · 2019 to 2019
$2.0M
Siemens MAGNETOM Prisma 3T MRI scannerS10OD018482 · OD · UNIVERSITY OF UTAH · PI PARKER, DENNIS L · 2015 to 2015
$1.2M
Advanced Treatment Endpoint Assessment in MR-guided Focused UltrasoundR03EB029204 · NIBIB · UNIVERSITY OF UTAH · PI ODEEN, HENRIK CARL AXEL · 2020 to 2021
$153k
NCI NIH HHS P30 CA042014NCI NIH HHS R01 CA259686NCI NIH HHS R37 CA224141NIBIB NIH HHS R03 EB029204NIH HHS S10 OD018482NIH HHS S10 OD026788
6 · The paper itself

Abstract

objectiveWe present the development of a non-contrast multi-parametric magnetic resonance (MPMR) imaging biomarker to assess treatment outcomes for magnetic resonance-guided focused ultrasound (MRgFUS) ablations of localized tumors. Images obtained immediately following MRgFUS ablation were inputs for voxel-wise supervised learning classifiers, trained using registered histology as a label for thermal necrosis.

methodsVX2 tumors in New Zealand white rabbits quadriceps were thermally ablated using an MRgFUS system under 3 T MRI guidance. Animals were re-imaged three days post-ablation and euthanized. Histological necrosis labels were created by 3D registration between MR images and digitized H&E segmentations of thermal necrosis to enable voxel-wise classification of necrosis. Supervised MPMR classifier inputs included maximum temperature rise, cumulative thermal dose (CTD), post-FUS differences in T2-weighted images, and apparent diffusion coefficient, or ADC, maps. A logistic regression, support vector machine, and random forest classifier were trained in red a leave-one-out strategy in test data from four subjects.

resultsIn the validation dataset, the MPMR classifiers achieved higher recall and Dice than a clinically adopted 240 cumulative equivalent minutes at 43

conclusionsVoxel-wise registration of MPMR data to histological outcomes facilitated supervised learning of an accurate non-contrast MR biomarker for MRgFUS ablations in a rabbit VX2 tumor model.

Indexed as

Magnetic Resonance ImagingNeoplasmsAnimalsDiffusion Magnetic Resonance ImagingHumansNecrosisRabbitsUltrasonography

Identifiers

PMID37556341
PMCPMC10768718

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.