Evidence map›Paper›PMID 37556085›Full record

ArticleMagma (New York, N.Y.)2023

The impact of pre-processing and disease characteristics on reproducibility of T2-weighted MRI radiomics features.

Dyah Ekashanti Octorina Dewi, Mohammed R S Sunoqrot, Gabriel Addio Nketiah, Elise Sandsmark, Guro F Giskeødegård, Sverre Langørgen, Helena Bertilsson, Mattijs Elschot, Tone Frost Bathen

Abstract read
In one paragraph

Article in Magma (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Dyah Ekashanti Octorina Dewi *Department of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway.
Mohammed R S Sunoqrot *Department of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway. mohammed.sunoqrot@ntnu.no.ORCID http://orcid.org/0000-0001-9239-1683
Gabriel Addio NketiahDepartment of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway.
Elise SandsmarkDepartment of Radiology and Nuclear Medicine, St. Olavs Hospital, Trondheim University Hospital, 7030, Trondheim, Norway.
Guro F GiskeødegårdDepartment of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway.
Sverre LangørgenDepartment of Radiology and Nuclear Medicine, St. Olavs Hospital, Trondheim University Hospital, 7030, Trondheim, Norway.
Helena BertilssonDepartment of Cancer Research and Molecular Medicine, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway.
Mattijs ElschotDepartment of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway.
Tone Frost BathenDepartment of Circulation and Medical Imaging, NTNU-Norwegian University of Science and Technology, 7030, Trondheim, Norway. tone.f.bathen@ntnu.no.

Funding

Norges Forskningsråd 295013The Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 90265300The Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 90368401The Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 90793700The Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 982992100The Norwegian Cancer Society and Prostatakreftforeningen 215951
6 · The paper itself

Abstract

purposeTo evaluate the reproducibility of radiomics features derived via different pre-processing settings from paired T2-weighted imaging (T2WI) prostate lesions acquired within a short interval, to select the setting that yields the highest number of reproducible features, and to evaluate the impact of disease characteristics (i.e., clinical variables) on features reproducibility. MATERIALS AND

methodsA dataset of 50 patients imaged using T2WI at 2 consecutive examinations was used. The dataset was pre-processed using 48 different settings. A total of 107 radiomics features were extracted from manual delineations of 74 lesions. The inter-scan reproducibility of each feature was measured using the intra-class correlation coefficient (ICC), with ICC values > 0.75 considered good. Statistical differences were assessed using Mann-Whitney U and Kruskal-Wallis tests.

resultsThe pre-processing parameters strongly influenced the reproducibility of radiomics features of T2WI prostate lesions. The setting that yielded the highest number of features (25 features) with high reproducibility was the relative discretization with a fixed bin number of 64, no signal intensity normalization, and outlier filtering by excluding outliers. Disease characteristics did not significantly impact the reproducibility of radiomics features.

conclusionThe reproducibility of T2WI radiomics features was significantly influenced by pre-processing parameters, but not by disease characteristics. The selected pre-processing setting yielded 25 reproducible features.

Indexed as

Image Processing, Computer-AssistedMagnetic Resonance ImagingHumansMaleProstateReproducibility of ResultsRetrospective StudiesPre-processingProstate cancerRadiomicsReproducibilityT2W MRI

Identifiers

PMID37556085
PMCPMC10667400

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.