Evidence map›Paper›PMID 37555984›Full record

ArticlePlanta2023

Integrated transcriptome and physiological analysis revealed core transcription factors that promote flavonoid biosynthesis in apricot in response to pathogenic fungal infection.

Ting Chen, Hongyan Cao, Mengying Wang, Meng Qi, Yongjiang Sun, Yangbo Song, Qing Yang, Dong Meng, Na Lian

Abstract read
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Article in Planta, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

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0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Ting ChenBeijing Forestry University, Beijing, 100083, China.
Hongyan CaoBeijing Forestry University, Beijing, 100083, China.
Mengying WangBeijing Forestry University, Beijing, 100083, China.
Meng QiBeijing Forestry University, Beijing, 100083, China.
Yongjiang SunBeijing Forestry University, Beijing, 100083, China.
Yangbo SongCollege of Agriculture and Animal Husbandry, Qinghai University, Xining, 810016, China.
Qing YangBeijing Forestry University, Beijing, 100083, China.
Dong MengBeijing Forestry University, Beijing, 100083, China.ORCID https://orcid.org/0000-0002-4580-4673
Na LianBeijing Forestry University, Beijing, 100083, China. lianna@bjfu.edu.cn.
Beijing Forestry University · CNQinghai University · CN

Funding

the Beijing Natural Science Foundation 6212023the National Key R&D Program of China 2019YFD1000605-1the National Natural Science Foundation of China 31922058the National Natural Science Foundation of China 32171742the National Natural Science Foundation of China 32271831
6 · The paper itself

Abstract

MAIN

conclusionIntegrated transcriptome and physiological analysis of apricot leaves after Fusarium solani treatment. In addition, we identified core transcription factors and flavonoid-related synthase genes which may function in apricot disease resistance. Apricot (Prunus armeniaca) is an important economic fruit species, whose yield and quality of fruit are limited owing to its susceptibility to diseases. However, the molecular mechanisms underlying the response of P. armeniaca to diseases is still unknown. In this study, we used physiology and transcriptome analysis to characterize responses of P. armeniaca subjected to Fusarium solani. The results showed increasing malondialdehyde (MDA) content, enhanced peroxidase (POD) and catalase (CAT) activity during F. solani infestation. A large number of differentially expressed genes (DEGs), which included 4281 upregulated DEGs and 3305 downregulated DEGs, were detected in P. armeniaca leaves exposed to F. solani infestation. Changes in expression of transcription factors (TFs), including bHLH, AP2/ERF, and WRKY indicated their role in triggering pathogen-responsive genes in P. armeniaca. During the P. armeniaca response to F. solani infestation, the content of total flavonoid was changed, and we identified enzyme genes associated with flavonoid biosynthesis. Ectopic overexpression of PabHLH15 and PabHLH102 in Nicotiana benthamiana conferred elevated resistance to Fspa_1. Moreover, PabHLH15 and PabHLH102 positively interact with the promoter of flavonoid biosynthesis-related genes. A regulatory network of TFs regulating enzyme genes related to flavonoid synthesis affecting apricot disease resistance was constructed. These results reveal the potential underlying mechanisms of the F. solani response of P. armeniaca, which would help improve the disease resistance of P. armeniaca and may cultivate high-quality disease-resistant varieties in the future.

Indexed as

MycosesPrunus armeniacaDisease ResistanceFusariumTranscription FactorsTranscriptomeTranscription FactorsDisease resistanceFusarium solaniPrunus armeniacaRNA-seqSecondary metabolites

Identifiers

PMID37555984
OpenAlexW4385684417

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.