Evidence map›Paper›PMID 37555432›Full record

ArticlePlant physiology2023

Compartmentation of photosynthesis gene expression in C4 maize depends on time of day.

Ana Rita Borba, Ivan Reyna-Llorens, Patrick J Dickinson, Gareth Steed, Paulo Gouveia, Alicja M Górska, Celia Gomes, Johannes Kromdijk, Alex A R Webb, Nelson J M Saibo and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Diurnal dynamics of maize gene expression is associated with phyllosphere microbiome composition.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Investigating theProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Investigating thebioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Ana Rita BorbaDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0001-7400-8492
Ivan Reyna-LlorensDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0001-7964-7306
Patrick J DickinsonDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0003-1510-1325
Gareth SteedDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0001-6225-4848
Paulo GouveiaInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras 2780-157, Portugal.ORCID 0000-0003-1668-2045
Alicja M GórskaInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras 2780-157, Portugal.ORCID 0000-0002-3453-4209
Celia GomesInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras 2780-157, Portugal.ORCID 0000-0003-1159-0555
Johannes KromdijkDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0003-4423-4100
Alex A R WebbDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0003-0261-4375
Nelson J M SaiboInstituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras 2780-157, Portugal.ORCID 0000-0002-6679-3811
Julian M HibberdDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0003-0662-7958
University of Cambridge · GBInstituto de Biologia Experimental e Tecnológica · PT

Funding

BBSRC BB/L014130ERACAPS C4BREEDERC RG80867European Union 289582Fundação para a Ciência e Tecnologia UID/Multi/04551/2013POPH-QREN SFRH/BD/105739/2014
6 · The paper itself

Abstract

Compared with the ancestral C3 state, C4 photosynthesis occurs at higher rates with improved water and nitrogen use efficiencies. In both C3 and C4 plants, rates of photosynthesis increase with light intensity and are maximal around midday. We determined that in the absence of light or temperature fluctuations, photosynthesis in maize (Zea mays) peaks in the middle of the subjective photoperiod. To investigate the molecular processes associated with these temporal changes, we performed RNA sequencing of maize mesophyll and bundle sheath strands over a 24-h time course. Preferential expression of C4 cycle genes in these cell types was strongest between 6 and 10 h after dawn when rates of photosynthesis were highest. For the bundle sheath, DNA motif enrichment and gene coexpression analyses suggested members of the DNA binding with one finger (DOF) and MADS (MINICHROMOSOME MAINTENANCE FACTOR 1/AGAMOUS/DEFICIENS/Serum Response Factor)-domain transcription factor families mediate diurnal fluctuations in C4 gene expression, while trans-activation assays in planta confirmed their ability to activate promoter fragments from bundle sheath expressed genes. The work thus identifies transcriptional regulators and peaks in cell-specific C4 gene expression coincident with maximum rates of photosynthesis in the maize leaf at midday.

Indexed as

PhotosynthesisZea maysGene ExpressionPlant LeavesPromoter Regions, GeneticTranscription FactorsTranscription Factors

Identifiers

PMID37555432
PMCPMC10663113
OpenAlexW4385684301

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.