Evidence map›Paper›PMID 37552789›Full record

ArticleEuropace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology2023

Leak current, even with gigaohm seals, can cause misinterpretation of stem cell-derived cardiomyocyte action potential recordings.

Alexander P Clark, Michael Clerx, Siyu Wei, Chon Lok Lei, Teun P de Boer, Gary R Mirams, David J Christini, Trine Krogh-Madsen

Open access · hybridAbstract readComment
In one paragraph

Article in Europace : European pacing, arrhythmias, and cardiac electrophysiology : journal of the working groups on cardiac pacing, arrhythmias, and cardiac cellular electrophysiology of the European Society of Cardiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Single-cell ionic current phenotyping explains stem cell-derived cardiomyocyte action potential morphology.American journal of physiology. Heart and circulatory physiology · 2024
    Article
  6. Injection of IFrontiers in physiology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 4 countries.

Alexander P ClarkDepartment of Biomedical Engineering, Cornell University, Ithaca, NY, USA.ORCID 0000-0002-5200-6573
Michael ClerxCentre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK.ORCID 0000-0003-4062-3061
Siyu WeiDepartment of Physiology and Pharmacology, SUNY Downstate Health Sciences University, Brooklyn, NY, USA.ORCID 0000-0003-1085-6788
Chon Lok LeiInstitute of Translational Medicine, Faculty of Health Sciences, University of Macau, Macau, China.ORCID 0000-0003-0904-554X
Teun P de BoerDepartment of Medical Physiology, Division of Heart and Lungs, University Medical Center Utrecht, Utrecht, The Netherlands.ORCID 0000-0002-0561-6491
Gary R MiramsCentre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK.ORCID 0000-0002-4569-4312
David J ChristiniDepartment of Biomedical Engineering, Cornell University, Ithaca, NY, USA.ORCID 0000-0003-0852-2922
Trine Krogh-MadsenDepartment of Physiology and Biophysics, Weill Cornell Medicine, 1300 York Avenue, Box 75, Room C501D, New York, 10065 NY, USA.ORCID 0000-0003-2298-6918
Cornell University · USSUNY Downstate Health Sciences University · USUniversity of Nottingham · GBUniversity Medical Center Utrecht · NLUniversity of Macau · MO

Funding

Multiscale modeling to map cardiac electrophysiology between speciesU01HL136297 · NHLBI · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI CHRISTINI, DAVID J., SOBIE, ERIC A · 2017 to 2021
$3.2M
Predicting Drug Cardiotoxicity Targets Using iPSC-Derived Cardiomyocytes and Machine LearningF31HL154655 · NHLBI · CORNELL UNIVERSITY · PI CLARK, ALEXANDER P · 2020 to 2022
$99k
NHLBI NIH HHS F31 HL154655NHLBI NIH HHS U01HL136297Wellcome TrustWellcome Trust 212203/Z/18/Z
6 · The paper itself

Abstract

aimsHuman-induced pluripotent stem cell-derived cardiomyocytes (iPSC-CMs) have become an essential tool to study arrhythmia mechanisms. Much of the foundational work on these cells, as well as the computational models built from the resultant data, has overlooked the contribution of seal-leak current on the immature and heterogeneous phenotype that has come to define these cells. The aim of this study is to understand the effect of seal-leak current on recordings of action potential (AP) morphology. METHODS AND

resultsAction potentials were recorded in human iPSC-CMs using patch clamp and simulated using previously published mathematical models. Our in silico and in vitro studies demonstrate how seal-leak current depolarizes APs, substantially affecting their morphology, even with seal resistances (Rseal) above 1 GΩ. We show that compensation of this leak current is difficult due to challenges with obtaining accurate measures of Rseal during an experiment. Using simulation, we show that Rseal measures (i) change during an experiment, invalidating the use of pre-rupture values, and (ii) are polluted by the presence of transmembrane currents at every voltage. Finally, we posit that the background sodium current in baseline iPSC-CM models imitates the effects of seal-leak current and is increased to a level that masks the effects of seal-leak current on iPSC-CMs.

conclusionBased on these findings, we make recommendations to improve iPSC-CM AP data acquisition, interpretation, and model-building. Taking these recommendations into account will improve our understanding of iPSC-CM physiology and the descriptive ability of models built from such data.

Indexed as

Induced Pluripotent Stem CellsMyocytes, CardiacAction PotentialsArrhythmias, CardiacHumansStem CellsArrhythmiasComputer simulationInduced pluripotent stem cellsIon channelsPatch clamp

Identifiers

PMID37552789
PMCPMC10445319
OpenAlexW4385650439

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.