Evidence map›Paper›PMID 37552725›Full record

ArticleACS ES&T water2022

Development and Validation of a Simplified Method for Analysis of SARS-CoV-2 RNA in University Dormitories.

William Strike, Atena Amirsoleimani, Abisola Olaleye, Ann Noble, Kevin Lewis, Lee Faulkner, Spencer Backus, Sierra Lindeman, Katrina Eterovich, Melicity Fraley and 7 more

Open access · greenAbstract read
In one paragraph

Article in ACS ES&T water, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

William StrikeDepartments of Biomedical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.ORCID https://orcid.org/0000-0002-0917-5064
Atena AmirsoleimaniMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Abisola OlaleyeMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Ann NobleMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Kevin LewisEnvironmental Quality Management, University of Kentucky, 355 Cooper Drive, Lexington, Kentucky 40508, United States.
Lee FaulknerEnvironmental Quality Management, University of Kentucky, 355 Cooper Drive, Lexington, Kentucky 40508, United States.
Spencer BackusMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Sierra LindemanMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Katrina EterovichMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Melicity FraleyMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Mohammad Dehghan BanadakiMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Soroosh TorabiMechanical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.ORCID https://orcid.org/0000-0001-8574-3273
Alexus RockwardDepartments of Biomedical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
Eli ZeitlowDepartment of Mechanical Engineering, University of Wisconsin-Platteville, 1 University Plaza, Platteville, Wisconsin 53818, United States.
Matthew LiversedgeFamily and Community Medicine, University of Kentucky, 2195 Harrodsburg Rd, Ste 125, Lexington, Kentucky 40504, United States.
James KeckFamily and Community Medicine, University of Kentucky, 2195 Harrodsburg Rd, Ste 125, Lexington, Kentucky 40504, United States.
Scott BerryDepartments of Biomedical Engineering, University of Kentucky, 151 Ralph G. Anderson Building, Lexington, Kentucky 40506-0503, United States.
University of Kentucky · USUniversity of Wisconsin–Platteville · US

Funding

Pilot Project ProgramP30ES026529 · NIEHS · UNIVERSITY OF KENTUCKY · PI Erin N Haynes · 2017 to 2026
$15.4M
Wastewater Assessment for Coronavirus in Kentucky: Implementing Enhanced Surveillance TechnologyU01DA053903 · NIDA · UNIVERSITY OF KENTUCKY · PI BERRY, SCOTT M · 2021 to 2022
$3.4M
NIDA NIH HHS U01 DA053903NIEHS NIH HHS P30 ES026529
6 · The paper itself

Abstract

Over the course of the COVID-19 pandemic, wastewater surveillance has become a useful tool for describing SARS-CoV-2 prevalence in populations of varying size, from individual facilities (e.g., university residence halls, nursing homes, prisons) to entire municipalities. Wastewater analysis for SARS-CoV-2 RNA requires specialized equipment, expensive consumables, and expert staff, limiting its feasibility and scalability. Further, the extremely labile nature of viral RNA complicates sample transportation, especially in regions with limited access to reliable cold chains. Here, we present a new method for wastewater analysis, termed exclusion-based sample preparation (ESP), that substantially simplifies workflow (at least 70% decrease in time; 40% decrease in consumable usage compared with traditional techniques) by targeting the labor-intensive processing steps of RNA purification and concentration. To optimize and validate this method, we analyzed wastewater samples from residence halls at the University of Kentucky, of which 34% (44/129) contained detectible SARS-CoV-2 RNA. Although concurrent clinical testing was not comprehensive, student infections were identified in the 7 days following a positive wastewater detection in 68% of samples. This pilot study among university residence halls validated the performance and utility of the ESP method, laying the foundation for future studies in regions of the world where wastewater testing is not currently feasible.

Identifiers

PMID37552725
PMCPMC9115885
OpenAlexW4229378050

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.