Evidence map›Paper›PMID 37552331›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2023

Quantitative trait loci mapping of polyphenol metabolites from a 'Latham' x 'Glen Moy' red raspberry (Rubus idaeus L) cross.

G J McDougall, J W Allwood, G Dobson, C Austin, S Verrall, C J Alexander, R D Hancock, J Graham, C A Hackett

Open access · hybridAbstract read
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

G J McDougallPlant Biochemistry and Food Quality Group, Environmental and Biochemical Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK. gordon.mcdougall@hutton.ac.uk.ORCID http://orcid.org/0000-0002-2285-0124
J W AllwoodPlant Biochemistry and Food Quality Group, Environmental and Biochemical Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0003-4256-4034
G DobsonPlant Biochemistry and Food Quality Group, Environmental and Biochemical Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0001-9926-4206
C AustinPlant Biochemistry and Food Quality Group, Environmental and Biochemical Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0002-4203-1089
S VerrallEcological Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0001-6433-2694
C J AlexanderBiomathematics and Statistics Scotland (BioSS), The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0003-4995-1678
R D HancockCell and Molecular Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0001-5465-3814
J GrahamCell and Molecular Sciences Department, The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0003-1701-5850
C A HackettBiomathematics and Statistics Scotland (BioSS), The James Hutton Institute, Dundee, DD2 5DA, Scotland, UK.ORCID http://orcid.org/0000-0003-0657-9941
James Hutton Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveThe objective of this study was to investigate the genetic control of polyphenol accumulation in red raspberry (Rubus idaeus L).

methodsThe levels of total anthocyanins and 37 individual polyphenol metabolites were measured over three years in a raspberry biparental mapping population. Quantitative trait loci (QTLs) for these traits were mapped onto a high-density SNP linkage map.

resultsAt least one QTL was detected for each trait, with good consistency among the years. On four linkage groups (LG), there were major QTLs affecting several metabolites. On LG1, a QTL had large effects on anthocyanins and flavonols containing a rutinoside or rhamnose group. On LG4, a QTL had large effects on several flavonols and on LG5 and LG6 QTLs had large effects on ellagic acid derivatives. Smaller QTLs were found on LG2 and LG3.

conclusionThe identification of robust QTLs for key polyphenols in raspberry provides great potential for marker-assisted breeding for improved levels of potentially health beneficial components.

Indexed as

Quantitative Trait LociRubusAnthocyaninsFlavonolsMetabolomicsPolyphenolsAnthocyaninsFlavonolsPolyphenolsAnthocyaninsEllagitanninsGenetic controlHeritabilityPolyphenolsQTLsRaspberry

Identifiers

PMID37552331
PMCPMC10409862
OpenAlexW4385644883

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.