Evidence map›Paper›PMID 37552050›Full record

ArticleeLife2023

Precision RNAi using synthetic shRNAmir target sites.

Thomas Hoffmann, Alexandra Hörmann, Maja Corcokovic, Jakub Zmajkovic, Matthias Hinterndorfer, Jasko Salkanovic, Fiona Spreitzer, Anna Köferle, Katrin Gitschtaler, Alexandra Popa and 10 more

Abstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Thomas Hoffmann *Research Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.ORCID 0000-0002-1589-0013
Alexandra Hörmann *Boehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Maja Corcokovic *Boehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Jakub ZmajkovicResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.ORCID 0000-0001-7061-6538
Matthias HinterndorferResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.ORCID 0000-0003-2435-4690
Jasko SalkanovicBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Fiona SpreitzerBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Anna KöferleBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.ORCID 0000-0003-1601-7774
Katrin GitschtalerBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Alexandra PopaBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Sarah OberndorferBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Florian AnderschResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.
Markus SchaeferResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.
Michaela FellnerResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.
Nicole BudanoBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Jan G RuppertBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Paolo ChettaBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Melanie WurmBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.
Johannes ZuberResearch Institute of Molecular Pathology (IMP), Campus-Vienna-Biocenter 1, Vienna, Austria.ORCID 0000-0001-8810-6835
Ralph A NeumüllerBoehringer Ingelheim RCV GmbH & Co KG, Doktor-Boehringer-Gasse, Vienna, Austria.ORCID 0000-0002-1514-6278

Funding

Swiss National Science Foundation P2BSP3_188110
6 · The paper itself

Abstract

Loss-of-function genetic tools are widely applied for validating therapeutic targets, but their utility remains limited by incomplete on- and uncontrolled off-target effects. We describe artificial RNA interference (ARTi) based on synthetic, ultra-potent, off-target-free shRNAs that enable efficient and inducible suppression of any gene upon introduction of a synthetic target sequence into non-coding transcript regions. ARTi establishes a scalable loss-of-function tool with full control over on- and off-target effects.

Indexed as

RNA InterferenceRNA, Small InterferingRNA, Small Interferingcancercancer biologyEGFRhumanKRASloss-of-functionmouseRNAitarget validation

Identifiers

PMID37552050
PMCPMC10409502

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.