Evidence map›Paper›PMID 37550452›Full record

ArticleNature structural & molecular biology2023

The structure of the NuA4-Tip60 complex reveals the mechanism and importance of long-range chromatin modification.

Alexander Fréchard, Céline Faux, Rozalie Hexnerova, Corinne Crucifix, Gabor Papai, Ekaterina Smirnova, Conor McKeon, Florie Lo Ying Ping, Dominique Helmlinger, Patrick Schultz and 1 more

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In one paragraph

Article in Nature structural & molecular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Mechanistic insights into INO80-type chromatin remodelers.Current opinion in structural biology · 2025
    Review
  4. Article
  5. Cryo-EM structures reveal the acetylation process of piccolo NuA4.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Article
  8. Structure of the human TIP60 complex.Nature communications · 2024
    Article
  9. Review
  10. Article
  11. Article
  12. The NuA4 histone acetyltransferase: variations on a theme of SAGA.Nature structural & molecular biology · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Alexander FréchardInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France.ORCID http://orcid.org/0000-0002-9365-0488
Céline FauxCentre de Recherche en Biologie cellulaire de Montpellier (CRBM), Université de Montpellier, CNRS, Montpellier, France.
Rozalie HexnerovaInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France.
Corinne CrucifixInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France.
Gabor PapaiInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France.ORCID http://orcid.org/0000-0002-2779-8679
Ekaterina SmirnovaInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France.
Conor McKeonCentre de Recherche en Biologie cellulaire de Montpellier (CRBM), Université de Montpellier, CNRS, Montpellier, France.
Florie Lo Ying PingCentre de Recherche en Biologie cellulaire de Montpellier (CRBM), Université de Montpellier, CNRS, Montpellier, France.
Dominique HelmlingerCentre de Recherche en Biologie cellulaire de Montpellier (CRBM), Université de Montpellier, CNRS, Montpellier, France. dhelmlinger@crbm.cnrs.fr.ORCID http://orcid.org/0000-0003-1501-0423
Patrick SchultzInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France. patrick.schultz@igbmc.fr.ORCID http://orcid.org/0000-0002-7310-6186
Adam Ben-ShemInstitut de Génétique et de Biologie Moléculaire et Cellulaire, Integrated Structural Biology Department, Illkirch, France. adam@igbmc.fr.ORCID http://orcid.org/0000-0003-0297-8662
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histone acetylation regulates most DNA transactions and is dynamically controlled by highly conserved enzymes. The only essential histone acetyltransferase (HAT) in yeast, Esa1, is part of the 1-MDa NuA4 complex, which plays pivotal roles in both transcription and DNA-damage repair. NuA4 has the unique capacity to acetylate histone targets located several nucleosomes away from its recruitment site. Neither the molecular mechanism of this activity nor its physiological importance are known. Here we report the structure of the Pichia pastoris NuA4 complex, with its core resolved at 3.4-Å resolution. Three subunits, Epl1, Eaf1 and Swc4, intertwine to form a stable platform that coordinates all other modules. The HAT module is firmly anchored into the core while retaining the ability to stretch out over a long distance. We provide structural, biochemical and genetic evidence that an unfolded linker region of the Epl1 subunit is critical for this long-range activity. Specifically, shortening the Epl1 linker causes severe growth defects and reduced H4 acetylation levels over broad chromatin regions in fission yeast. Our work lays the foundations for a mechanistic understanding of NuA4's regulatory role and elucidates how its essential long-range activity is attained.

Indexed as

HistonesSaccharomyces cerevisiae ProteinsAcetylationChromatinDNAHistone AcetyltransferasesNucleosomesSaccharomyces cerevisiaeChromatinDNAEpl1 protein, S cerevisiaeHistone AcetyltransferasesHistonesNuA4 protein, S cerevisiaeNucleosomesSaccharomyces cerevisiae ProteinsSwc4 protein, S cerevisiae

Identifiers

PMID37550452
OpenAlexW4385638459

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.