ArticleCommunications biology2023
Multi-omic analyses reveal the unique properties of chia (Salvia hispanica) seed metabolism.
Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Genome-wide variation analysis of two Salvia hispanica L. genotypes and implication for associations with metabolic and adaptive traits.Journal, genetic engineering & biotechnology · 2026Article
- Advances in seed omics.Journal of experimental botany · 2026Review
- Multiomics analysis revealed the temporally common and specific molecular changes in Arabidopsis thaliana (L.) under salt stress.BMC genomics · 2025Article
- Application of machine learning and genomics for orphan crop improvement.Nature communications · 2025Review
- Chromosome-scale Salvia hispanica L. (Chia) genome assembly reveals rampant Salvia interspecies introgression.The plant genome · 2024Article
- Multi Omics Applications in Biological Systems.Current issues in molecular biology · 2024Review
- Shotgun proteomics profiling of chia seeds (Frontiers in plant science · 2024Article
- A chromosome-level genome assembly of Korean mint (Agastache rugosa).Scientific data · 2023Article
- Reference genome of the nutrition-rich orphan crop chia (Frontiers in plant science · 2023Article
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Authors and funding
10 authors.
Funding
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Abstract
Chia (Salvia hispanica) is an emerging crop considered a functional food containing important substances with multiple potential applications. However, the molecular basis of some relevant chia traits, such as seed mucilage and polyphenol content, remains to be discovered. This study generates an improved chromosome-level reference of the chia genome, resolving some highly repetitive regions, describing methylation patterns, and refining genome annotation. Transcriptomic analysis shows that seeds exhibit a unique expression pattern compared to other organs and tissues. Thus, a metabolic and proteomic approach is implemented to study seed composition and seed-produced mucilage. The chia genome exhibits a significant expansion in mucilage synthesis genes (compared to Arabidopsis), and gene network analysis reveals potential regulators controlling seed mucilage production. Rosmarinic acid, a compound with enormous therapeutic potential, was classified as the most abundant polyphenol in seeds, and candidate genes for its complex pathway are described. Overall, this study provides important insights into the molecular basis for the unique characteristics of chia seeds.
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