Evidence map›Paper›PMID 37550221›Full record

ArticleFEMS microbiology letters2023

The phosphodiesterase RmcA contributes to the adaptation of Pseudomonas putida to l-arginine.

Chiara Scribani-Rossi, María Antonia Molina-Henares, Simone Angeli, Francesca Cutruzzolà, Alessandro Paiardini, Manuel Espinosa-Urgel, Serena Rinaldo

Open access · hybridAbstract read
In one paragraph

Article in FEMS microbiology letters, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Gene expression reprogramming ofMicrobiology (Reading, England) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Chiara Scribani-RossiLaboratory affiliated to Istituto Pasteur Italia, Fondazione Cenci Bolognetti, Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.
María Antonia Molina-HenaresDepartment of Biotechnology and Environmental Protection, Estación Experimental del Zaidin , CSIC, Profesor Albareda, 1, Granada, 18008, Spain.
Simone AngeliLaboratory affiliated to Istituto Pasteur Italia, Fondazione Cenci Bolognetti, Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.
Francesca CutruzzolàLaboratory affiliated to Istituto Pasteur Italia, Fondazione Cenci Bolognetti, Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.ORCID 0000-0002-4621-2135
Alessandro PaiardiniLaboratory affiliated to Istituto Pasteur Italia, Fondazione Cenci Bolognetti, Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.ORCID 0000-0001-9078-7545
Manuel Espinosa-UrgelDepartment of Biotechnology and Environmental Protection, Estación Experimental del Zaidin , CSIC, Profesor Albareda, 1, Granada, 18008, Spain.ORCID 0000-0002-6862-0682
Serena RinaldoLaboratory affiliated to Istituto Pasteur Italia, Fondazione Cenci Bolognetti, Department of Biochemical Sciences "A. Rossi Fanelli", Sapienza University of Rome, P.le Aldo Moro 5, 00185, Rome, Italy.ORCID 0000-0003-0682-023X
Istituto Pasteur · ITEstación Experimental del Zaidín · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Amino acids are crucial in nitrogen cycling and to shape the metabolism of microorganisms. Among them, arginine is a versatile molecule able to sustain nitrogen, carbon, and even ATP supply and to regulate multicellular behaviors such as biofilm formation. Arginine modulates the intracellular levels of 3'-5'cyclic diguanylic acid (c-di-GMP), a second messenger that controls biofilm formation, maintenance and dispersion. In Pseudomonas putida, KT2440, a versatile microorganism with wide biotechnological applications, modulation of c-di-GMP levels by arginine requires the transcriptional regulator ArgR, but the connections between arginine metabolism and c-di-GMP are not fully characterized. It has been recently demonstrated that arginine can be perceived by the opportunistic human pathogen Pseudomonas aeruginosa through the transducer RmcA protein (Redox regulator of c-di-GMP), which can directly decrease c-di-GMP levels and possibly affect biofilm architecture. A RmcA homolog is present in P. putida, but its function and involvement in arginine perceiving or biofilm life cycle had not been studied. Here, we present a preliminary characterization of the RmcA-dependent response to arginine in P. putida in modulating biofilm formation, c-di-GMP levels, and energy metabolism. This work contributes to further understanding the molecular mechanisms linking biofilm homeostasis and environmental adaptation.

Indexed as

Bacterial ProteinsPseudomonas putidaArginineBiofilmsCyclic GMPGene Expression Regulation, BacterialHumansPhosphoric Diester HydrolasesPseudomonas aeruginosaArginineBacterial ProteinsCyclic GMPPhosphoric Diester Hydrolasesargininebiofilmc-di-GMPmetabolic reprogrammingnutrient

Identifiers

PMID37550221
PMCPMC10423028
OpenAlexW4385680701

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.