Evidence map›Paper›PMID 37547007›Full record

ArticlebioRxiv : the preprint server for biology2023

The Role of the Tyrosine-Based Sorting Signals of the ORF3a Protein of SARS-CoV-2 on Intracellular Trafficking, Autophagy, and Apoptosis.

Wyatt Henke, Maria Kalamvoki, Edward B Stephens

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Wyatt HenkeDepartment of Microbiology, Molecular Genetics, and Immunology, 2000 Hixon Hall, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, Kansas 66160.
Maria KalamvokiDepartment of Microbiology, Molecular Genetics, and Immunology, 2000 Hixon Hall, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, Kansas 66160.
Edward B StephensDepartment of Microbiology, Molecular Genetics, and Immunology, 2000 Hixon Hall, University of Kansas Medical Center, 3901 Rainbow Blvd., Kansas City, Kansas 66160.
University of Kansas Medical Center · US

Funding

RADx-UP: Improving the Response of Local Urban and Rural Communities to Disparities in Covid-19 TestingUL1TR002366 · NCATS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI Mario Castro, JAMES STEVEN LEEDER · 2017 to 2026
$44.3M
Immunomodulatory effects of coronavirus membrane proteins E, M, and S.R21AI158229 · NIAID · UNIVERSITY OF KANSAS MEDICAL CENTER · PI KALAMVOKI, MARIA, STEPHENS, EDWARD BRICE · 2020 to 2020
$421k
NCATS NIH HHS UL1 TR002366NIAID NIH HHS R21 AI158229
6 · The paper itself

Abstract

The open reading frame 3a (ORF3a) is an accessory transmembrane protein that is important to the pathogenicity of SARS-CoV-2. The cytoplasmic domain of ORF3a has three canonical tyrosine-based sorting signals (YxxΦ; where x is any amino acid and Φ is a hydrophobic amino acid with a bulky -R group). They have been implicated in the trafficking of membrane proteins to the cell plasma membrane and to intracellular organelles. Previous studies have indicated that mutation of the

Identifiers

PMID37547007
PMCPMC10402054
OpenAlexW4385241916

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.